DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRUA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain 2308) GN=dxs PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.504e-30 Identity = 68/136 (50.00%), Postives = 84/136 (61.76%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ EG VALL +G +Q CL A L G+ TVADARF KPLD L+R L + H L+ VEEG++GGF SHV F+A DGLLD G+K R ++LPD Y +H P A AGL I T + L R Sbjct: 494 EIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLVREHEVLVMVEEGAVGGFSSHVLQFLATDGLLDRGLKVRALMLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_AGRVS (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dxs PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.504e-30 Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ EG VALL +G + CL A L G+ TVADARF KPLD+ L+R+L ++H LITVEEG++GGFGS V H +A +GLLD G+K R +VLPD +++ A P AGL I +T + L R Sbjct: 496 IGKGRIIKEGSKVALLSFGTRLAECLVAAEDLDAAGLPTTVADARFAKPLDLDLIRQLARHHAVLITVEEGAVGGFGSQVLHMLANEGLLDHGLKVRSLVLPDLWMDQAKPDVMYEKAGLDAKGIVSTVFTALSR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29 Identity = 63/135 (46.67%), Postives = 90/135 (66.67%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ EG VA+L +G + KA L+ GI T+ADARF KPLD +++ +L NH LITVEEG++GGFGSHV+ ++ +G+ D+G K+R +VLPD +I+ +SP A+AG+ I LS+LG Sbjct: 499 EIGKGRIITEGTRVAILSFGTRLAEVQKAGEALAARGITPTIADARFAKPLDREMILDLVANHEALITVEEGAIGGFGSHVAQLLSDEGVFDTGFKYRSMVLPDIFIDQSSPADMYAVAGMNAADIETKVLSVLG 633
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=dxs PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.472e-29 Identity = 67/140 (47.86%), Postives = 85/140 (60.71%), Query Frame = -2 Query: 173 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 592 EIGKG+V +G VALL +G + C KA L+ LG+ TVADARF KPLD+ LV +L H LIT+EEGS+GGFGSHV ++ G LD VK R +VLPD +++H +P A AGL I LG+ A Sbjct: 493 EIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLGLSTTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMRAMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29 Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG+V +G VALL +G + KA L+ LG+ TVADARF KPLD++LV +L ++H L+T+EEGS+GGFGSHV +A G+LD VK R +VLPD +++H +P A AGL I +LG+ Sbjct: 496 EIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHOPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris GN=dxs PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29 Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG+V +G VALL +G + KA L+ LG+ TVADARF KPLD++LV +L ++H L+T+EEGS+GGFGSHV +A G+LD VK R +VLPD +++H +P A AGL I +LG+ Sbjct: 496 EIGKGRVIRQGNKVALLSFGTRLAEAEKAADELATLGLSTTVADARFMKPLDVELVLKLARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.228e-29 Identity = 63/135 (46.67%), Postives = 88/135 (65.19%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ +GK VALL +G + C KA L+ G+ ++ADARF KPLD +LV +L ++H LIT+EEGS+GGFGSHV ++A G+LD G+K R +VLPD + +H +P A AGL I +LG+ Sbjct: 497 IGKGRMIRQGKQVALLSFGTRLAECEKAADELAAHGLSASIADARFMKPLDEELVLKLARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGK 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHIEC (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=dxs PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.216e-29 Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 +IGKG++ EG VALL +G + +CL A L G+ TVADARF KPLD +L+R+L ++H LITVEEGS+GGFGS V +++ +GLLD+G+K R +V+PD ++E A P A AGL I +T L R Sbjct: 495 QIGKGRIVKEGTKVALLSFGTRLADCLLASEDLEAAGLSTTVADARFAKPLDHELLRQLARHHEMLITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALRR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHILW (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=dxs PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29 Identity = 65/135 (48.15%), Postives = 88/135 (65.19%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGKG++ EG VALL +G + +CL A L G+ TVADARF KPLD L+R+ ++H +ITVEEGS+GGFGS V +++ +GLLD+G+K R +V+PD ++E A P A AGL I +T LGR Sbjct: 496 IGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQFARHHEMVITVEEGSVGGFGSQVMQYLSSEGLLDNGLKIRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFRALGR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BRAJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium japonicum GN=dxs PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.506e-29 Identity = 66/137 (48.18%), Postives = 89/137 (64.96%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSG-VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG++ +G +ALL +G + C KA L+ G+ T+ADARF KPLD +LV +L ++H LIT+EEGS+GGFGSHV+ F+ G LDSG VK+R +VLPD + +H +P A AGL I A LG+ Sbjct: 515 EIGKGRMIRQGSKIALLSFGTRLAECEKAADELAAHGLSTTIADARFMKPLDTELVLKLARDHEILITIEEGSVGGFGSHVAQFLTDQGALDSGMVKFRTMVLPDVFQDHDTPAAMYARAGLDAKGIVAKVFEALGK 651 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |