DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_MAGSM (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetococcus sp. (strain MC-1) GN=dxs PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIG+G+ +G+ A+L G V L+A A+L + GI V+V DARF KPLD +L++E+ + L+ E GGFGS V ++ G LD G+K R + +PD YI H + + GL IA T LLG Sbjct: 488 EIGRGRTLRKGEHAAILAVGQPVHPALEAAAILEQQGISVSVYDARFVKPLDQRLLQEVAMHGVVLVVEENAVQGGFGSAVLESLSNQGALDRGLKIRCMGIPDRYIPHGTQKELRGEIGLDAVGIATTLKELLG 622
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_MICAN (1-deoxy-D-xylulose-5-phosphate synthase OS=Microcystis aeruginosa (strain NIES-843) GN=dxs PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.955e-19 Identity = 57/134 (42.54%), Postives = 79/134 (58.96%), Query Frame = -2 Query: 197 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 589 IGKG++ G D+ LLGYG MV L+ +LS+ GI+ TV +ARF KPLD +L+ L Q ++T+EEG L GGFGS V L+ L D+ V + +PD ++HA+P + A GLT IA L+ Sbjct: 496 IGKGEILRSGDDILLLGYGTMVNTSLQVAEILSEHGIEATVVNARFVKPLDTELIFPLAQRLGKVVTLEEGCLMGGFGSAV-----LEALQDANILVPVKRFGVPDKLVDHATPEESFADLGLTSPQIAQQVLA 624
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CYAP8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 8801) GN=dxs PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.746e-19 Identity = 56/139 (40.29%), Postives = 79/139 (56.83%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IGKG++ G D+ +LGYG MV L+A L + GI+ TV +ARF KPLD +L+ L Q ++T+EEG L GGFGS V+ + +L V + +PD ++HA+P Q A GLT IA L + R+ Sbjct: 496 IGKGEILRNGDDLLILGYGTMVNTALQAAETLREHGIEATVVNARFVKPLDTELILPLAQRIGKVVTLEEGCLMGGFGSAVAEAFSDHNVL---VPLKRFGVPDRLVDHATPDQSKADLGLTSPQIAEQILQVFFSNRQ 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEPF (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18 Identity = 61/140 (43.57%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLGR 592 EIGKG V +G VALL +G + LK L D TV D RF KP+D LVRE+ +H L+T+EE + +GG G VS F+A + +L S + + LPD Y+EHA P Q LA GL I A L LL R Sbjct: 501 EIGKGVVRRQGSKVALLVFGVQMAEALKVAETL-----DATVVDMRFVKPMDEALVREIANSHDLLVTIEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEVGIEAAVRERLELLNR 632
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CYAP7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7424) GN=dxs PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18 Identity = 56/141 (39.72%), Postives = 79/141 (56.03%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IGKG++ G D+ LLGYG MV ++ +L + GI+ TV +ARF KPLD L+ L + ++T+EEG L GGFGS V+ + LLD V + +PD ++HA P + A GLT IA L +T+E Sbjct: 495 IGKGEILRNGDDLLLLGYGTMVNTAMQVAEILGEHGIEATVVNARFVKPLDTDLIVPLAKQTGKVVTLEEGCLMGGFGSAVA-----EALLDHNVLVPVKRFGVPDQLVDHAKPDESFADLGLTSSQIADEVLKSFFKTQE 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEF5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dxs PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18 Identity = 60/142 (42.25%), Postives = 81/142 (57.04%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATA---LSLLG 592 EIGKG + +G+ VALL +G + L+ L D TV D RF KPLD LVRE+ +H L+T+EE + +GG G VS ++A + +L +PI+ LPD Y+EHA P Q LA GL I A+ L+LLG Sbjct: 501 EIGKGVIRRQGRQVALLVFGVQLAEALQVAEKL-----DATVVDMRFVKPLDEALVREIASSHELLVTIEENAIMGGAGGAVSEYLARENIL------KPILHLGLPDAYVEHAKPAQMLAECGLDEAGIEASVRQRLALLG 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEA7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=dxs PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18 Identity = 59/137 (43.07%), Postives = 75/137 (54.74%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG V G VALL +G + +K G+D TVAD RF KPLD LVREL +H L+++EE + +GG GS V F+A +GL V + LPD Y+EHA P++ LA GL I L R Sbjct: 498 EIGKGVVRRRGGKVALLVFGVQLAEAMKVAE-----GLDATVADMRFVKPLDEALVRELAGSHELLVSIEENAVMGGAGSAVGEFLAREGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAVRQRLDR 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNY3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechocystis sp. (strain PCC 6803) GN=dxs PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.564e-18 Identity = 55/138 (39.86%), Postives = 82/138 (59.42%), Query Frame = -2 Query: 182 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 592 EIGK ++ G DV LLGYG+MV L+ LL + GI+ TV +ARF KPLD +L+ L + ++T+EEG L GGFGS V+ + + +L V + + +PD ++HA+P Q GLT +A ++ L +T Sbjct: 495 EIGKAEILRSGDDVLLLGYGSMVYPALQTAELLHEHGIEATVVNARFVKPLDTELILPLAERIGKVVTMEEGCLMGGFGSAVAEALMDNNVL---VPLKRLGVPDILVDHATPEQSTVDLGLTPAQMAQNIMASLFKT 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxs PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.373e-18 Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = -2 Query: 212 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 IGK +V G +V +L YG+MV L+A +L + GI TV +ARF KPLD +L+ L Q ++TVEEG L GGFGS V + LLD+ ++ P++ +PD ++EHA+P + LA GL IA Sbjct: 501 IGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVG-----EALLDADIR-VPLLRLGVPDVWVEHATPEESLAELGLNSVGIA 624
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DEHSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Dehalococcoides sp. (strain BAV1) GN=dxs PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.711e-18 Identity = 52/139 (37.41%), Postives = 82/139 (58.99%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IG+ ++ V G DVA+L G V +A +L++ GI T+ + R+ PLD +LV ++ Q+H +L+TVEE + GG GS ++ +A GL++ +K I +PD ++EH + + A GL G IA LSL+G E Sbjct: 487 IGQNEILVNGSDVAILATGKSVAFAREALEILTESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGLVNK-IKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 624 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |