DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_SYNJB (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. GN=dxs PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 55/127 (43.31%), Postives = 76/127 (59.84%), Query Frame = -2 Query: 212 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 589 IGK +V G +V +L YG+MV L+A +L + GI TV +ARF KPLD +L+ L + ++TVEEG L GGFGS V+ + LD D V + +PD ++EHA+P + LA GL IA Sbjct: 501 IGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISATVVNARFAKPLDTELILPLAEQSRLVVTVEEGCLMGGFGSAVAEAL-LDA--DLAVPLLRLGVPDVWVEHATPEESLAELGLNSAGIA 624
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEU5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri (strain A1501) GN=dxs PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 58/125 (46.40%), Postives = 73/125 (58.40%), Query Frame = -2 Query: 230 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGL 592 EIGK V G VALL +G + L+ L D TV D RF KPLD L+REL +H L+TVEE S +GG GS V+ F+A +G+L RPI+ LPD Y+EHA P++ LA GL Sbjct: 500 EIGKAVVRRRGSKVALLVFGVQLPEALQVGDAL-----DATVVDMRFVKPLDEALLRELAGSHELLVTVEENSIMGGAGSAVAEFLAAEGVL------RPILHLGLPDYYVEHAKPSEMLAECGL 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CYAA5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain ATCC 51142) GN=dxs PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = -2 Query: 182 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRT 589 IGKG++ G DV L+GYG MV L+ +L + GI+ TV +ARF KPLD +L+ L Q ++T+EEG L GGFGS V+ + LLD V + +PD ++HA P + A GLT IA L T Sbjct: 496 IGKGEILRNGDDVLLVGYGTMVHQSLQVAEILKEHGIEATVVNARFVKPLDTELIVPLAQRIGKVVTLEEGCLMGGFGSAVA-----EALLDHDVVVPIKRFGVPDKLVDHAKPDESKADLGLTSPQIAEEIRQLFFNT 629
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSESM (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. tomato GN=dxs PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18 Identity = 60/139 (43.17%), Postives = 80/139 (57.55%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 592 EIGKG V +G+ VA+L +G + A AL+ +D TV D RF KPLD LVRE +H L+T+EE + +GG G+ VS F+A +L S + + LPD Y+EHA P Q LA GL I A L+L+G Sbjct: 501 EIGKGVVRRQGQGVAILVFGVQL-----AEALVVAEKLDATVIDMRFVKPLDEALVRETAASHELLVTLEENAVMGGAGAAVSEFLARANILKSVLH---LGLPDVYVEHAKPAQMLAECGLDAEGIEAAINERLALIG 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSE14 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dxs PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18 Identity = 60/139 (43.17%), Postives = 79/139 (56.83%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 592 EIGKG V +G+ VA+L +G + A AL+ +D TV D RF KPLD LV E NH L+T+EE + +GG G+ VS F+A +L S + + LPD Y+EHA P Q LA GL I A L+L+G Sbjct: 500 EIGKGVVRRQGQGVAILVFGVQL-----ADALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKSVLH---LGLPDTYVEHAKPAQMLAECGLDAQGIEAAINERLALIG 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DEHSC (1-deoxy-D-xylulose-5-phosphate synthase OS=Dehalococcoides sp. (strain CBDB1) GN=dxs PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.742e-18 Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = -2 Query: 176 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTRE 589 IG+ ++ V G DVA+L G V A +L++ GI T+ + R+ PLD +LV ++ Q+H +L+TVEE + GG GS ++ +A GL++ +K I +PD ++EH + + A GL G IA LSL+G E Sbjct: 501 IGQNEILVNGSDVAILATGKSVAFAKDALEILTESGIKPTLVNNRYISPLDSELVLKIAQSHKYLVTVEENVISGGLGSRINTLLAEAGLVNK-IKIANIGIPDKFVEHGNQSLLRAKYGLDGKGIAQRVLSLVGNPNE 638
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_TRIEI (1-deoxy-D-xylulose-5-phosphate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=dxs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 54/134 (40.30%), Postives = 81/134 (60.45%), Query Frame = -2 Query: 200 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATAL 589 IGKG++ G DV +LGYG+MV + ++ +LS+ G+ TV +ARF KPLD +L+ L Q ++T+EEG L GGFGS V+ + L+D+ V P++ +PD ++HA P + A GLT +A L Sbjct: 496 IGKGEILRNGDDVLILGYGSMVYSAMQTAEILSEHGVAATVVNARFVKPLDTELILPLAQRIGQVVTMEEGCLMGGFGSAVT-----EALMDNNV-LVPVLRLGVPDKLVDHAKPDESKADLGLTPSQMAERIL 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEAE (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa GN=dxs PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 59/137 (43.07%), Postives = 73/137 (53.28%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG V G VALL +G + +K L D TV D RF KPLD LVREL +H L+T+EE + +GG GS V F+A +GL V + LPD Y+EHA P++ LA GL I L R Sbjct: 498 EIGKGVVRRRGGRVALLVFGVQLAEAMKVAESL-----DATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAVRQRLDR 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dxs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 59/137 (43.07%), Postives = 73/137 (53.28%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG V G VALL +G + +K L D TV D RF KPLD LVREL +H L+T+EE + +GG GS V F+A +GL V + LPD Y+EHA P++ LA GL I L R Sbjct: 498 EIGKGVVRRRGGRVALLVFGVQLAEAMKVAESL-----DATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAVRQRLDR 626
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEA8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=dxs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 59/137 (43.07%), Postives = 73/137 (53.28%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 EIGKG V G VALL +G + +K L D TV D RF KPLD LVREL +H L+T+EE + +GG GS V F+A +GL V + LPD Y+EHA P++ LA GL I L R Sbjct: 498 EIGKGVVRRRGGRVALLVFGVQLAEAMKVAESL-----DATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAVRQRLDR 626 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |