DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DEHE1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Dehalococcoides ethenogenes (strain 195) GN=dxs PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.272e-17 Identity = 52/140 (37.14%), Postives = 81/140 (57.86%), Query Frame = -2 Query: 173 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 589 IG+ +V G ++A+ G V +A +L++ GI T+ + R+ PLD +L+ ++ NH +LITVEE L GG GS ++ +A GL+++ VK I +PD ++EH + + A GL G IA LSL+ T EA Sbjct: 501 IGENEVLASGSEIAIFATGKSVAFAKEAMEILAESGIKPTLVNNRYISPLDTELILKIAGNHKYLITVEENVLSGGLGSRINTILAEAGLVNA-VKIANIAVPDKFVEHGNQSLLRAKYGLDGKGIAQKVLSLMANTGEA 639
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEU2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=dxs PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.662e-17 Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT---ALSLLG 592 EIGKG V +G+ VA+L +G + A AL+ +D TV D RF KPLD LV E NH L+T+EE + +GG G+ VS F+A +L S + + LPD Y+EHA P Q L GL I A L+L+G Sbjct: 500 EIGKGVVRRQGQGVAILAFGVQL-----AEALVVAEKLDATVIDMRFVKPLDEALVSEAAANHELLVTLEENAVMGGAGAAVSEFLARANILKSVLH---LGLPDVYVEHAKPAQMLTECGLDAQGIEAAINERLALIG 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_PSEFS (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain SBW25) GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 57/130 (43.85%), Postives = 72/130 (55.38%), Query Frame = -2 Query: 206 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 592 EIGKG V +G A L +G + LK ID TV D RF KPLD LVRE+ H L+TVEE + +GG G+ VS F+A + +L S + + LPD Y+EHA P Q LA GL I A+ Sbjct: 501 EIGKGIVRRQGSKTAFLVFGVQLAEALKVAEK-----IDATVVDMRFVKPLDEALVREIAGGHELLVTVEENAIMGGAGAAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEAGIEAS 622
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_GLOVI (1-deoxy-D-xylulose-5-phosphate synthase OS=Gloeobacter violaceus GN=dxs PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.170e-17 Identity = 58/131 (44.27%), Postives = 77/131 (58.78%), Query Frame = -2 Query: 206 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SLGGFGSHVSHFIALDGLLDSG--VKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAAT 589 IGK +V G D+ ++ G MV L+A ALLS+ GID TV +ARF KPLD +L+ L + ++TVEEG +GGFGS V L+ L+D G V I + D ++ HA +Q L L GLT IA T Sbjct: 498 IGKAEVLRSGDDLLIVAIGTMVHPSLQAAALLSEHGIDATVVNARFAKPLDTELLLPLARRIGRVVTVEEGCRMGGFGSAV-----LEALMDGGIAVPTLRIGIDDKFVTHAGRSQLLDLLGLTPSGIAKT 623
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CYAP4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxs PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17 Identity = 56/132 (42.42%), Postives = 76/132 (57.58%), Query Frame = -2 Query: 197 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALS 589 IGK +V +G D+ +L YG+MV L+A +L + GI TV +ARF KPLD +L+ L + ++TVEEG L GGFGS V + +L V I +PD +EHA+P Q A GLT IA L+ Sbjct: 494 IGKAEVLRQGDDLLMLAYGSMVYPTLQAAEILREHGIAATVVNARFAKPLDTELILPLAEKLGRVVTVEEGCLIGGFGSAVLEALQDQEIL---VPVTRIGIPDILVEHATPDQSKAQLGLTSAQIAERVLA 622
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURCM (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=dxs PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.834e-17 Identity = 59/135 (43.70%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V EGK VA+L +G MV A +L + +D TVA+ RF KP+D LVREL + H +L+TVEEG +GG GS ++ L++SGV RP++ LPD +I+H P + LA GL G IA Sbjct: 501 LGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAGEELDATVANMRFVKPIDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALMESGV-IRPVIQLGLPDQFIDHGDPAKLLAQCGLDGAGIA 624
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RALME (1-deoxy-D-xylulose-5-phosphate synthase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dxs PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = -2 Query: 230 IGKGKVFVEG-----KDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEG-SLGGFGSHVSHFIALDGLLDSGVKWRPIV--LPDNYIEHASPTQQLALAGL 589 +GKG++ EG + VA++ +G+MV L A L D TVA+ RF KPLD++LV++L NH FL+TVEEG ++GG GS V L+ L ++G++ +V LPD +I+H P L+L GL Sbjct: 494 VGKGEIRREGHARAGQRVAIMAFGSMVHPALTAAEQL-----DATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAV-----LEALAEAGIELPTLVLGLPDKFIDHGDPAHLLSLCGL 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BURA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia ambifaria (strain MC40-6) GN=dxs PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 59/135 (43.70%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 212 IGKGKVF-----VEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIA 589 +GKG+V EGK VA+L +G MV A +L + +D TVA+ RF KP+D LVREL + H +L+TVEEG +GG GS ++ L++SGV RP++ LPD +I+H P + LA GL G IA Sbjct: 489 LGKGEVRRRTSQPEGKRVAILAFGTMV-----APSLAAGEELDATVANMRFVKPVDAALVRELAETHDYLVTVEEGCVMGGAGS-----ACVEALMESGV-IRPVIQLGLPDQFIDHGDPAKLLAQCGLDGAGIA 612
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS2_GEOMG (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dxs2 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = -2 Query: 167 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALL 592 EIG+G++ EG DVA++ G+ V +A LL GI TV +ARF KPLD +L+ + ++TVEE +L GGFGS V +A +G+ D V+ + I +PD +IE Q GL G IAAT + L +A L Sbjct: 491 EIGRGELLTEGDDVAIVAIGSTVYPAQEAAKLLEARGIRATVVNARFVKPLDRELILGAARRTGCIVTVEENALQGGFGSAVLELLADEGMTD--VRAKRIGIPDRFIEQGPQPQLRKDLGLDGAGIAATVEAFLTAKGQAAL 631
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_DICT6 (1-deoxy-D-xylulose-5-phosphate synthase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dxs PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17 Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = -2 Query: 191 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLL 592 EIGK ++ GK+V +L G+MV L+A ++L GI T+ + RF KPLD+ + EL +H +ITVEE + GG +S + +L K PI LPD +IE + + GL+GH IA +S+L Sbjct: 482 EIGKSEILKYGKNVLILAIGSMVYPALEAESILKTEGISPTIVNVRFLKPLDVLTLEELISSHDVIITVEENVITGGLFGAISELV---NILKLNKKVLPISLPDKFIEQGNAQLLRDIYGLSGHKIAEKIISVL 613 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |