DT214504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.670e-25 Identity = 72/204 (35.29%), Postives = 109/204 (53.43%), Query Frame = -2 Query: 217 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 825 QVEYAM+A+ N+ +AIGI KDGVV EK V SKL + S ++++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W I K K+ R+ ++A K++ D + +LEL+ V + G+ Sbjct: 23 QVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVA-KIIYIVHDEVKDKAFELELSWVGELTKGR 224
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 4.670e-25 Identity = 72/204 (35.29%), Postives = 110/204 (53.92%), Query Frame = -2 Query: 217 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 825 QVEYAM+A+ N+ +AIGI KDGVV EK V SKL + S ++++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W I K K+ R+ ++A K++ D + +LEL+ V + +G+ Sbjct: 23 QVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVA-KIIYIVHDEVKDKAFELELSWVGELTNGR 224
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 115.161 bits (287), Expect = 4.670e-25 Identity = 72/204 (35.29%), Postives = 110/204 (53.92%), Query Frame = -2 Query: 217 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSG-NYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGK 825 QVEYAM+A+ N+ +AIGI KDGVV EK V SKL + S ++++ +D HV AVAG+++DA L + AR +A + + +P++ L + YT + +RPFG SF+ + N G QLYM DPSG +YG W I K K+ R+ ++A K++ D + +LEL+ V + +G+ Sbjct: 23 QVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEG-SNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVA-KIIYIVHDEVKDKAFELELSWVGEITNGR 224
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.966e-25 Identity = 70/197 (35.53%), Postives = 106/197 (53.81%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTAR-VQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 Q+EYA+ A+ +A+GI + +G+VL EKK +S L S S K+ I ++ +G+ D +L++ AR V Y Y E P LVQ + Q TQ GG+RP+GVS L AGWD+ G LY DPSG+Y WK ++ L++ Y + + E+AV +AL L +T++ + D +E+ V Sbjct: 20 QIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPS-SLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWDEG-GPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLELEDAVHIALLTLKETIEG-EMNGDTIEIGIV 213
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.040e-24 Identity = 75/204 (36.76%), Postives = 115/204 (56.37%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG--------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA+E +AIGI + +GV L EK++TS L++ S S EK+ +ID H+ CA++G+++DA LI+ ARV+ Q + + Y E M VE + Q++ + QFG RPFGV+ LF G D+ G QL+ DPSG + QS L++ Y + +EA++ +L +L + M+ L + +ELA V Sbjct: 23 QVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPS-SIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLA---LQFGEEDADPGAMSRPFGVALLFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.040e-24 Identity = 64/189 (33.86%), Postives = 109/189 (57.67%), Query Frame = -2 Query: 265 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYK--DDISREEAVQLALKVLSKTMDSTSLT 825 Q+EYAMEA+ G+A+ + SK VLV K+ +S+L + +K++ +DDHV A++G+ +DA +L N R + Y Y Y+ M VE+LV + D Q +TQ G RP+GV L AG+D+ G +Y + PSGN+ +K ++ L++ ++ ++ + E+ + L+ L +T+ +T T Sbjct: 21 QIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSEL---GSYQKKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGRRPYGVGLLVAGYDQ-LGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLITHGLRALRETIPNTDDT 205
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.775e-24 Identity = 68/203 (33.50%), Postives = 115/203 (56.65%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA+EA+ ++IGI + +GV+L EK+ TSKL+ + + EK+ K+D H+ AG+++D+ L+ A+++AQ + + Y + VE + QS+ + QFG RPFGV+ LFAG D+ G +L+ DPSG + K + LK+ Y D ++ +E +++AL +L + M+ L S +E+ + Sbjct: 23 QVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLM-VNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLA---LQFGDDDVKASMSRPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVMEE-KLNSANVEVVVI 219
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.318e-24 Identity = 71/200 (35.50%), Postives = 109/200 (54.50%), Query Frame = -2 Query: 247 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGG-------LRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLEL 825 QVEYA+EAI +AIGI + +GVVL EK++TS L+ ST EK+ ++D H+ CA +G+M+DA LI ARV+ Q + + Y E M +E Q++ + G RPFGV+ LFAG + QL+ DPSG + Q L+ ++ D++ +EA+ ++L L + M+ L S +E+ Sbjct: 23 QVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPST-VEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQP-QLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEE-KLNSTNVEV 219
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.164e-24 Identity = 66/193 (34.20%), Postives = 109/193 (56.48%), Query Frame = -2 Query: 247 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLEL 825 QV+YA +A+ N+G+ + I +KDGVVL EK V SK+L S S +++ ID HV A+AG ++DA LI AR +A+ Y Y +P+P++ L Q + +T +G +RPFG S G D+ YG QL++ +PSG+ G+ ++ L++ +++ EA++ +++ D +LEL Sbjct: 23 QVDYANKAVENSGTLVAIKAKDGVVLGVEKLVPSKML-CSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGSVRPFGCSIAITGIDQ-YGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCREAIKEVSRIIYSVHDEVKDKDFELEL 213
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 6.744e-24 Identity = 66/196 (33.67%), Postives = 109/196 (55.61%), Query Frame = -2 Query: 244 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD--DISREEAVQLALKVLSKTMDSTSLTSDKLELA 825 QVEYAMEA+ +AIG+ S+ VVL K S+L S+ K++K+DDH+ A+AG+ +D +L R ++ +++ Y+ P+PV +LV L D Q TQ RP+GV L G D++ G LY + PSGNY ++ ++ L++ ++ D SRE+ ++ A+ + +T+ +L S +A Sbjct: 21 QVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL---SSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDES-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAILAVRETLQGETLKSSLCTVA 212 The following BLAST results are available for this feature:
BLAST of DT214504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214504 ID=DT214504; Name=DT214504; organism=Citrus sinensis; type=EST; length=826bpback to top |