DT214504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.455e-18 Identity = 60/199 (30.15%), Postives = 97/199 (48.74%), Query Frame = -2 Query: 238 QVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDY--KDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA +AI + +A+ + D V+ +K+V L+ T T +Y+I V C G++ DA I A+ +A + Y MP E L + + D Q YTQ +R G + LF +D G ++Y DP+G Y G K S L++ K +++ EA++LA++ L ++ + S LE+ V Sbjct: 24 QVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVT-SVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSL-GIDVRSKDLEVVVV 220
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.900e-18 Identity = 51/141 (36.17%), Postives = 78/141 (55.32%), Query Frame = -2 Query: 403 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWK 825 QVEYA EA+ N +A+G+ D VVL K+ + + S+ EK +K+D+HV A++G+++D L R + Y Y + P+ L + Q + QF G RPFGV L AG+D+ G +LY + PSG+ +K Sbjct: 21 QVEYANEAVNNGSAAVGVKGADYVVLTALKR--NPVSGLSSYQEKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQ-GPRLYQTVPSGDVFDFK 158
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.482e-18 Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGN----YGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA+EAI +G+ S VLV K+ +L S+ +K+ K D+H+ ++AG+ DA +L N R Q + + + VE+ LCD Q TQ G RP+GV L G+DK+ G L PSGN YG + L K D + +E ++ ++ +S+++ SLT D L +A V Sbjct: 21 QVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADEL---SSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKS-GAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIV 216
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_CAEEL (Proteasome subunit alpha type-1 OS=Caenorhabditis elegans GN=pas-6 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.242e-18 Identity = 48/134 (35.82%), Postives = 81/134 (60.45%), Query Frame = -2 Query: 424 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPS 825 QVEYA+EA+ + +GI S+ V+V K+ + L S+ +K+Y+ID H ++AG++SD IL + + + + Y++ +P+++L +S+ Q TQ+ G RPFGV L AG+DK+ G + +DPS Sbjct: 21 QVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDL---SSHQKKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKD-GAHIIQTDPS 150
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.234e-18 Identity = 57/200 (28.50%), Postives = 101/200 (50.50%), Query Frame = -2 Query: 238 QVEYAMEAIGNAG-SAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDD---ISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA +A NAG +++G+ K+ ++ +KKV KL+ ST + ++ I + C + G ++DA ++ AR +A + Y PMP + L + + + Q TQ +RP GV+ D G L+ DP+G Y G+K + L++ +K D + + V+ ++ L ++ ST S +L++ V Sbjct: 22 QVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDAST-VKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSL-STDFKSTELQIGVV 219
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_CHICK (Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.530e-18 Identity = 56/183 (30.60%), Postives = 96/183 (52.46%), Query Frame = -2 Query: 283 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD--DISREEAVQLALKVLSKTM 825 Q+EYAMEA+ + +G+ SK VLV K+ S+L + +K+ +D+H+ ++AG+ +DA +L N R + + + P+PV +LV + Q TQ G RP+GV L AG+D + G ++ + PS NY K ++ L++ + D + E V+ L+ L +T+ Sbjct: 20 QIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHQKKILYVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNELVKHGLRALRETL 198
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.232e-17 Identity = 54/183 (29.51%), Postives = 97/183 (53.01%), Query Frame = -2 Query: 283 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD--DISREEAVQLALKVLSKTM 825 Q+EYAMEA+ + +G+ SK VLV K+ S+L + +K+ +D+H+ ++AG+ +DA +L N R + + + P+PV +LV + Q TQ G RP+GV L AG+D + G ++ + PS NY + ++ L++ + + + +E V+ L+ L +T+ Sbjct: 21 QIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETL 199
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_DROME (Proteasome subunit alpha type-1 OS=Drosophila melanogaster GN=Pros35 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.232e-17 Identity = 58/191 (30.37%), Postives = 97/191 (50.79%), Query Frame = -2 Query: 259 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKD--DISREEAVQLALKVLSKTMDSTSLTSD 825 QVEYAMEA+ + +G+ +KD VLV K TS+L T K+ IDDH+ ++AG+ +DA +L R + Y ++Y PV +L+ +L + Q TQ RP+GV L AG+D+ G +Y PS + K ++ L+++ D S++E ++ ++ + T+ + D Sbjct: 21 QVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ---RKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDER-GPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILGTLPTDEQGKD 207
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_PONAB (Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 415 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNY 825 Q+EYAMEA+ + +G+ SK VLV K+ S+L + +K+ +D+H+ ++AG+ +DA +L N R + + + P+PV +LV + Q TQ G RP+GV L AG+D + G ++ + PS NY Sbjct: 21 QIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANY 153
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA1_MACFA (Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.101e-17 Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = -2 Query: 415 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNY 825 Q+EYAMEA+ + +G+ SK VLV K+ S+L + +K+ +D+H+ ++AG+ +DA +L N R + + + P+PV +LV + Q TQ G RP+GV L AG+D + G ++ + PS NY Sbjct: 21 QIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSEL---AAHRKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANY 153 The following BLAST results are available for this feature:
BLAST of DT214504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214504 ID=DT214504; Name=DT214504; organism=Citrus sinensis; type=EST; length=826bpback to top |