DT214504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.353e-40 Identity = 85/196 (43.37%), Postives = 131/196 (66.84%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ Y Y EP PV +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y+DD++ E+A++LAL L+KTM++ S +D +E+A + Sbjct: 25 QVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPD-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAG--INDRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENPS--ADNIEVAVI 215
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.766e-40 Identity = 88/218 (40.37%), Postives = 139/218 (63.76%), Query Frame = -2 Query: 172 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 825 QV YA EA+ +A+G+ KDGVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I + Y+DD++ +EA++LA+ L+KTM+ S ++ +E+A + + K++ S E + K L Sbjct: 25 QVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTMEKPS--AENIEVAVITVKDK---KFRKLSKEEIEKFL 234
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.307e-40 Identity = 84/196 (42.86%), Postives = 132/196 (67.35%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+DDI +++A++LA+ L+KT++ T++ +E+A + Sbjct: 25 QVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP--TAEGIEVAYI 215
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.307e-40 Identity = 84/196 (42.86%), Postives = 132/196 (67.35%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QV YA EA+ +A+G+ KDGVVL EK++TSKL++ S S EK++ IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +L+ +DPSG Y WK +I ++ Y+DDI +++A++LA+ L+KT++ T++ +E+A + Sbjct: 25 QVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPS-SYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP--TAEGIEVAYI 215
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.953e-39 Identity = 85/198 (42.93%), Postives = 129/198 (65.15%), Query Frame = -2 Query: 232 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFL 825 QV YA EA+ +A+G+ K GVVL EK++TS+L++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y WK +I ++ Y DDI E A++LA+ L+KT++ S + +E+A + L Sbjct: 25 QVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNEKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAILALAKTLEEPS--PESIEVAYITL 217
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.351e-39 Identity = 89/220 (40.45%), Postives = 137/220 (62.27%), Query Frame = -2 Query: 166 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVK 825 QVEYA EA+ +AIGI KDGVVL ++++TSKL++ S EK+++IDDHVA A +G+++DA +LI+ AR++AQ Y Y E + +E L + +CD KQ YTQ GG+RPFGVS L AG DKN +L+ +DPSG +K +L+++Y+DDI+ +E ++LA+ L+K + K E +V ++ +++ E + KL+ K Sbjct: 24 QVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIR-SIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEA-RLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDI-----KPENVDVCIITVKDAQFKKIPVEEIKKLIEK 236
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.683e-39 Identity = 83/196 (42.35%), Postives = 128/196 (65.31%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QV YA EA+ +A+G+ K+GVVL EK++TSKL++ S S EK+++IDDH+A A +GI++DA +L++ AR++AQ Y Y EP+P+ LV+ +CD KQ +TQ+GG+RPFG + L AG N +LY +DPSG Y W+ +I + Y DD+ E A++LA+ L+KT++ S + +E+A + Sbjct: 25 QVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPS-SYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAG--VNDKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLEEPS--PESIEVAYI 215
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.400e-37 Identity = 82/196 (41.84%), Postives = 127/196 (64.80%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA EA+ +A+GI ++GVVL +K+VTSKL++ S EK+Y+ID H+ A AG+++DA +L+ AR++AQ Y Y Y EP+ V+ LV+++CD KQ YTQ GG+RPFG + L AG D G +L+ +DPSG K + +++Y++D++ +EA++LA++ L + T+D LE+A V Sbjct: 25 QVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPE-SIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEA-SREETTADNLEIAVV 217
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.185e-36 Identity = 81/196 (41.33%), Postives = 126/196 (64.29%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA EA+ +AIGI K+GV+L+ +K+V SKLL+ T EK+YKID+H+ A +G+++DA +LI+ AR++AQ Y EP+ V++L + +CD KQ YTQ+GG+RPFGVS L AG D+ +LY +DPSG +K +++Y+DD+S ++A+ L L + +++S L + +E+ V Sbjct: 23 QVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADT-IEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEVP--KLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIES-ELVPENIEVGYV 214
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.918e-35 Identity = 87/223 (39.01%), Postives = 132/223 (59.19%), Query Frame = -2 Query: 157 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLLVKHGV 825 QVEYA EA+ +G+ K GVVL EK+ S L +S S EK+Y ID+HVA + +G+++DA ILI+ AR A + + Y EP+ VE L +++C+ KQ YTQFGG RPFGV+ L AG D+ +G +LY +DPSG Y G+ L+++YK D+ E ++LALK L+ ++ T + ++ A + + K + S + ++ LL K G+ Sbjct: 24 QVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSS-SLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDR-HGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALKALASAVEITDSANVEVAYATI-----EEKKMRKMSQDEVASLLTKLGL 239 The following BLAST results are available for this feature:
BLAST of DT214504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214504 ID=DT214504; Name=DT214504; organism=Citrus sinensis; type=EST; length=826bpback to top |