DT214504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.227e-34 Identity = 79/196 (40.31%), Postives = 123/196 (62.76%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA EA+ +A+GI KDGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ ARV+AQ +Y E + VE L + +CD KQ YT GG RPFG++ L G D+ + +L+ +DPSG +K IL++ Y +++S E ++LA+ LSKT + L + +++A V Sbjct: 25 QVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTE--ELKPENIDMAIV 216
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.226e-33 Identity = 84/222 (37.84%), Postives = 132/222 (59.46%), Query Frame = -2 Query: 166 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKV--KYQVCSPEALSKLLVK 825 QVEYA EA+ +A+GI DGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YTQ GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +++ E ++LAL LSKT + L + +++A + SGK+ K V E + K + K Sbjct: 25 QVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTE--ELKPENIDMA--IVKDSGKLVEKISVDEIEKIVKAVYK 240
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.601e-33 Identity = 79/218 (36.24%), Postives = 132/218 (60.55%), Query Frame = -2 Query: 172 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 825 QVEYA EA+ +A+G+ +GV+L+ +KK+ SKL++ + S EK+ IDD+VA +G+++DA +LI+ AR+ AQ+ Y + +E LV+ + D Q YTQ+GG+RP+GVS +FAG D+ G +L+ DP+G +K S L+++YK+ +S +EAV L +K L +++ ++L+ E+ + G KY++ E + K L Sbjct: 23 QVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQN-SLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLEE----GEELKAPEIASITVGS-KYRIYGAEEVKKFL 233
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.732e-33 Identity = 80/199 (40.20%), Postives = 123/199 (61.81%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + S L++ + D+S +EA +A+ +L + M+ +T + +++A+V Sbjct: 23 QVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVMEE-KVTPNNVDIAKV 218
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.568e-33 Identity = 80/199 (40.20%), Postives = 123/199 (61.81%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + S L++ + DI+ +EA +A+ +L + M+ +T + +++A+V Sbjct: 23 QVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVMEE-KVTPNNVDIAKV 218
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.659e-33 Identity = 80/199 (40.20%), Postives = 123/199 (61.81%), Query Frame = -2 Query: 238 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEV 825 QVEYA+EAI +AIG+ +KDGVVL EK+VTS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q++CD + + RPFGVS L AG D+N G LY +DPSG + S L++ Y +++ +EA +AL +L + M+ +T + +++A+V Sbjct: 23 QVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVMEE-KVTPNNVDIAKV 218
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.085e-33 Identity = 81/229 (35.37%), Postives = 135/229 (58.95%), Query Frame = -2 Query: 151 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEA----LSKLLVKHGVTQ 825 QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ S EK+++ID+H+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YTQ+GG+RP+G + L AG D N +L+ +DPSG +K + + DY++D++ + A+ L + L K + + LE+ V L K++ PE + ++L KH T+ Sbjct: 22 QVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAE-SIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEG-KFDAGTLEVGVVSLEDK---KFRKLGPEEVENYVQQILEKHKGTE 244
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.085e-33 Identity = 80/194 (41.24%), Postives = 120/194 (61.86%), Query Frame = -2 Query: 244 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELA 825 Q+E+A++A + GSAIGI +K+GVVL+ EKK+ S L TS +K+ I +++ AG+ D+ +LI AR ++++Y Y+E +PV QLV+ L Q +TQ GG+RPFGVS L AG+D+ G LY DPSG+Y WK ++ L++ Y DD+ E+A+Q AL + + + T LT +ELA Sbjct: 20 QIEHALQAAASGGSAIGIKAKNGVVLITEKKLHS--LVDVTSVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEK-GPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEKRYSDDLEIEDAIQTALITIKEGFE-TQLTEFNMELA 209
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.038e-32 Identity = 77/218 (35.32%), Postives = 132/218 (60.55%), Query Frame = -2 Query: 172 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 825 QVEYA EA+ +A+G+ +GV+L+ +KKV S+L++ + S EK+ IDD+VA +G+++DA +L++ AR+ AQ+ Y + +E LV+ + D Q YTQ+GG+RP+GVS +FAG D+ G +L+ DP+G +K S L+++YK+++ +EAV L +K L +++ ++L+ E+ + G KY++ E + K L Sbjct: 23 QVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQN-SIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQ-IGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEE----GEELKAPEIASITVGN-KYRIYDQEEVKKFL 233
BLAST of DT214504 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.038e-32 Identity = 80/218 (36.70%), Postives = 129/218 (59.17%), Query Frame = -2 Query: 172 QVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXQSILKQDYKDDISREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLMPSGKVKYQVCSPEALSKLL 825 QVEYA EA+ +A+GI KDGV L+ EKKV S+L++ TS EK+ IDD VA +G+++DA +LI+ AR+ Q+ Y M +E LV+ + D Q YTQ+GG+RP+GVS +FAG D + G +L+ DP+G +K + L+++YK+++S +EA+++ + L + S ++ E+ + G+ + V + E +SK L Sbjct: 23 QVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVE-KTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAIRMGIAALKSAVADES----SMKEPEIASIKMGET-FHVFTSEEVSKYL 233 The following BLAST results are available for this feature:
BLAST of DT214504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 179
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214504 ID=DT214504; Name=DT214504; organism=Citrus sinensis; type=EST; length=826bpback to top |