EY680081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCSK (Peptide chain release factor 2 OS=Mycobacterium sp. (strain KMS) GN=prfB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20 Identity = 67/209 (32.06%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 88 RIKQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEME----AIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFPGT 693 +++QEA + NLWDD +++ +V +L+ + + +++LR + E+ ++ ++A E A + G A A L V ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA++ Y V D + G+KSAT YA+G LS E G H L+ F N S V +L V+ H P T Sbjct: 34 KLEQEAS--DPNLWDDQSRAQKVTSELSHAQNELRRVEELRQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVD--IEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPET 238
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCSJ (Peptide chain release factor 2 OS=Mycobacterium sp. (strain JLS) GN=prfB PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20 Identity = 67/209 (32.06%), Postives = 106/209 (50.72%), Query Frame = 1 Query: 88 RIKQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEME----AIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFPGT 693 +++QEA + NLWDD +++ +V +L+ + + +++LR + E+ ++ ++A E A + G A A L V ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA++ Y V D + G+KSAT YA+G LS E G H L+ F N S V +L V+ H P T Sbjct: 34 KLEQEAS--DPNLWDDQSRAQKVTSELSHAQNELRRVEELRQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVD--IEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDVPET 238
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CORA7 (Peptide chain release factor 2 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=prfB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.729e-20 Identity = 55/166 (33.13%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 100 EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 EA + +LWDDP + +V +L+ + L LR + E+ ++S+LAE E D + ++ ++ E++ +L G D A + I++G+ G+ WAE L+ MY RWA+K G++ V D + G+KSAT EY +G LS E GAH L+ Sbjct: 36 EAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNSLRGRIEDLPVMSELAEEEG-DEASQELVETELKELGAAIESLEVTTMLSGEYDEREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLV 200
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_SYNPX (Peptide chain release factor 2 OS=Synechococcus sp. (strain WH8102) GN=prfB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 8.788e-20 Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 1 Query: 100 EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 E + + WDD + + + +L + + L D ++AK +L E+E D + A + + LD++E+ +LL G D EGA +TI AG+ G + WA+ LL MY RWA+ G + V + + G+KS TIE E YA+GYL E G H L+ Sbjct: 37 EQLAAQPDFWDDQQAAQKQMRRLDEVKAQLQQLADWGGAVDDAKATLELYELEP-DEEMLTEAQEGLNQLRQGLDRWELERLLSGDYDKEGAVLTINAGAGGTDAQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLV 201
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCA9 (Peptide chain release factor 2 OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=prfB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.148e-19 Identity = 63/204 (30.88%), Postives = 101/204 (49.51%), Query Frame = 1 Query: 88 RIKQ-EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 RIK E + NLWDD + +V +L+ + + +++LR + ++ ++ +LAE E+ D + A + + + ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA+ Y V D + G+KSAT +A+G LS E G H L+ F N S V +L V+ H P Sbjct: 31 RIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEELRSRLDDLPVLYELAE-ESEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIDIP 233
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_SACEN (Peptide chain release factor 2 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=prfB PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.958e-19 Identity = 64/192 (33.33%), Postives = 93/192 (48.44%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 +LWDD + V +L + +KDLR + E+ +++ +L+E E D GL + A + K L+ E+ LL G D A VTI+A + G+ +AE L+ MYVRWA++ Y V D + G+KSAT YA+G LS E G H L+ F N V +L V+ H P Sbjct: 43 DLWDDVEHAQRVSSQLVHRQSELRKIKDLRQRVEDLEVLYELSEDEGDDSGLAE-ADSERTKLKKDLEALEVRTLLSGDYDQREAVVTIRAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVVEETDHVEIP 233
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCS2 (Peptide chain release factor 2 OS=Mycobacterium smegmatis GN=prfB PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.557e-19 Identity = 64/207 (30.92%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 88 RIKQ-EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKL---LDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 RI+Q E + NLWDD T++ +V L+ + + ++ LR + ++ ++ +LA + G A +++KL ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA+K Y + D + G+KSAT +A+G LS E G H L+ F N S V +L V+ H P Sbjct: 31 RIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGLRQRLDDLPVLYELAA----EAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVVETTDHIEIP 233
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_NOCFA (Peptide chain release factor 2 OS=Nocardia farcinica GN=prfB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.361e-19 Identity = 62/200 (31.00%), Postives = 96/200 (48.00%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKL-----LDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFPGTQ 696 +LW+D + V +L+ + + ++DLR + E+ ++ +LAE E G + A D + ++ E+ LL G D A V I++G+ G+ WAE L+ MY+RWAD+ GY V D + G+KSAT + YA+G LS E G H L+ F N V +L V+ H P T+ Sbjct: 43 DLWNDQDHAQRVTSELSHAQGELRRVEDLRRRLEDLPVLYELAEGEE---GEARTAALEEADAERAALHSDVEAMEVRTLLSGEYDKREALVNIRSGAGGVDAADWAEMLMRMYIRWADRHGYPVEVYDTSYAEEAGIKSATFAVKTPYAYGTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDHIEVPETE 239
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_HAEIN (Peptide chain release factor 2 OS=Haemophilus influenzae GN=prfB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 4.361e-19 Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 ++W+DP K+ + + +VVN +K+L E+ + +LA +EA D F A ++ + L++ E ++ G +D V ++AGS G + W E LL MY+RWA+ +G++ +++ G+KSATI+ EYAFG+L ETG H L+ Sbjct: 45 DVWNDPDKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELA-IEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLV 202
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_RHOSR (Peptide chain release factor 2 OS=Rhodococcus sp. (strain RHA1) GN=prfB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.439e-19 Identity = 61/189 (32.28%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 124 LWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASL--DVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTH 675 LW+D + +V +L+ S + +++LR + ++ ++ +LAE E D A R SL D++ + E+ +L G D A V I++G+ G+ WAE L+ MYVRWA+K GY V D + G+KSAT + Y++G LS E G H L+ F N V +L V+ H Sbjct: 44 LWNDQEHAQQVTSQLSHSQAELRRVEELRTRLDDMPVLYELAEDEGADAIADADAERHSLREDIAAM----EVKTMLSGEYDERDALVNIRSGAGGVDAADWAEMLMRMYVRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVVETTDH 228 The following BLAST results are available for this feature:
BLAST of EY680081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY680081 ID=EY680081; Name=EY680081; organism=Citrus sinensis; type=EST; length=897bpback to top |