EY680081

Overview
NameEY680081
Unique NameEY680081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CHLTA (Peptide chain release factor 2 OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=prfB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.517e-14
Identity = 45/169 (26.63%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   91 IKQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597
            ++Q+A+   +  WDD  ++ ++  ++A   + ++   +L+ K    +   +  E  + D  + K   +  +   K + ++E  +LL G  D     ++I AG+ G     W E LL MY+RWA    +R  V+D+   +  G+K  T++   EYA+GY   E+G H L+
Sbjct:   36 LEQQAVQDGF--WDDVVRAGKISERIARLKQQLSEFNELKNKVSAIQFFLE-DEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLV 201          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_BORPA (Peptide chain release factor 2 OS=Bordetella parapertussis GN=prfB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.517e-14
Identity = 48/159 (30.19%), Postives = 84/159 (52.83%), Query Frame = 1
Query:  124 LWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLD-VSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597
            +W+DP  + ++  +      VV  L +L     ++  + +LA  ++ D  L   A    +D   + L+  E  ++   P D     V I+AG+ G   + WA  LL  Y+++A+++G++  ++++      G+KSATI+ E EYAFGYL  ETG H L+
Sbjct:   48 IWNDPKHAQDLGREKKSLEDVVETLTELGSGLADSCELVELALADSDDATL--EAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLRTETGVHRLV 204          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CHLMU (Peptide chain release factor 2 OS=Chlamydia muridarum GN=prfB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.206e-14
Identity = 44/159 (27.67%), Postives = 78/159 (49.06%), Query Frame = 1
Query:  121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597
            + WDD +++  +  K+A   + +    +L+ K    K   +  E  + D  + K   +  +   K + ++E  +LL G  D     ++I AG+ G     W E L  MY RWA+  G++  V+D+   +  G+K  T++   EYA+GY   E+G H L+
Sbjct:   44 SFWDDVSRAGRISEKIARLKQQLLEYNELKNKINSIKFFLE-DEESSKDLEIQKELEKEFIFCEKKIAEWETLRLLAGELDRNSCFLSINAGAGGTESCDWVEMLFRMYSRWANSHGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLV 201          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CHLTB (Peptide chain release factor 2 OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=prfB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 44/169 (26.04%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   91 IKQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597
            ++Q+A+   +  WDD  ++ ++  ++A   + ++   +L+ K    +   +  E  + D  + K   +  +   K + ++E  +LL G  D     ++I AG+ G     W E +L MY+RWA    +R  V+D+   +  G+K  T++   EYA+GY   E+G H L+
Sbjct:   35 LEQQAVQDGF--WDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLE-DEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLV 200          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_CHLT2 (Peptide chain release factor 2 OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=prfB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 44/169 (26.04%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   91 IKQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597
            ++Q+A+   +  WDD  ++ ++  ++A   + ++   +L+ K    +   +  E  + D  + K   +  +   K + ++E  +LL G  D     ++I AG+ G     W E +L MY+RWA    +R  V+D+   +  G+K  T++   EYA+GY   E+G H L+
Sbjct:   35 LEQQAVQDGF--WDDVARAGKISERIARLKQQLSEFNELKNKVSTIQFFLE-DEESSKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLV 200          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_XANC5 (Peptide chain release factor 2 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=prfB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.229e-13
Identity = 54/184 (29.35%), Postives = 95/184 (51.63%), Query Frame = 1
Query:  121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKL-LDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKV 660
            ++W+D  ++  +  + +   K V  + D+     +A  + +LAE E  +      A  A LD  +  +++ E  ++  G  D   A V I+AG+ G   + WAE LL MY+RWA+  G++  +++    +  G+KSAT+  E EYA+G+L  E G H L+    F + +  H   T+V +  +V
Sbjct:   45 DVWNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQDEDTAL--AVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMYLRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV 226          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_KOSOT (Peptide chain release factor 2 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=prfB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.605e-13
Identity = 46/171 (26.90%), Postives = 84/171 (49.12%), Query Frame = 1
Query:   88 RIKQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEA-KLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597
            RI++E  + + ++W D  ++     KL    + + +  DL  K +E  + I    E+   D    +       +   ++ ++E++ LL  P D   A +++  G+ G   + WA  LL MY+RWA++  Y+   +++   +  G+KSATI     YA+G L  E G H L+
Sbjct:   35 RIEKE--LSDPSVWSDQRRAG----KLGQQAQALRSQLDLLNKVQELFENIDIAVELSEEDESYLENLNELLKEAEDMVKEFELNILLSSPYDAYNAYLSVHPGAGGTESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKLKYEAGVHRLV 199          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_VIBF1 (Peptide chain release factor 2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=prfB PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 47/196 (23.98%), Postives = 92/196 (46.94%), Query Frame = 1
Query:   13 KKKIEDAVLRAESXXXXXXXXXXXXRIKQ-EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597
            K +++D   R               R+++  A +   ++W++P ++  +  + A    VV  +  L    E+   + +LA +E  D   F        ++   L + E  ++  G +D     + +++GS G   + W   +L MY+RWA+ +G++  V++    +  G+K AT+    EYA+G+L  ETG H L+
Sbjct:    8 KNRLQDVSERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDLLDQGVEDVDGLLELA-VEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASDCYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEYAYGWLRTETGVHRLV 202          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_NEIMB (Peptide chain release factor 2 OS=Neisseria meningitidis serogroup B GN=prfB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 44/160 (27.50%), Postives = 79/160 (49.38%), Query Frame = 1
Query:  124 LWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLINF 603
            LW+DP ++ E+  +      +V  L ++    E+ +++ ++   E  + G F         + K +   E  ++   P D     + I AG+ G   E WA  L  MY R+A+++G+R  ++++   +  G+  ATI  E EYA+G L  ETG H L+ +
Sbjct:   48 LWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEG-FAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFRIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206          
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_NEIG2 (Peptide chain release factor 2 OS=Neisseria gonorrhoeae (strain NCCP11945) GN=prfB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.096e-13
Identity = 44/160 (27.50%), Postives = 80/160 (50.00%), Query Frame = 1
Query:  124 LWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLINF 603
            LW+DP ++ E+  +      +V  L ++    E+ +++ ++A  E  + G F         + K +   E  ++   P D     + I AG+ G   E WA  L  MY R+A+++G++  ++++   +  G+  ATI  E EYA+G L  ETG H L+ +
Sbjct:   48 LWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEG-FAAVKEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRY 206          
The following BLAST results are available for this feature:
BLAST of EY680081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 188
Match NameE-valueIdentityDescription
RF2_CHLTA5.517e-1426.63Peptide chain release factor 2 OS=Chlamydia tracho... [more]
RF2_BORPA5.517e-1430.19Peptide chain release factor 2 OS=Bordetella parap... [more]
RF2_CHLMU7.206e-1427.67Peptide chain release factor 2 OS=Chlamydia murida... [more]
RF2_CHLTB9.411e-1426.04Peptide chain release factor 2 OS=Chlamydia tracho... [more]
RF2_CHLT29.411e-1426.04Peptide chain release factor 2 OS=Chlamydia tracho... [more]
RF2_XANC51.229e-1329.35Peptide chain release factor 2 OS=Xanthomonas camp... [more]
RF2_KOSOT1.605e-1326.90Peptide chain release factor 2 OS=Kosmotoga oleari... [more]
RF2_VIBF12.096e-1323.98Peptide chain release factor 2 OS=Vibrio fischeri ... [more]
RF2_NEIMB2.096e-1327.50Peptide chain release factor 2 OS=Neisseria mening... [more]
RF2_NEIG22.096e-1327.50Peptide chain release factor 2 OS=Neisseria gonorr... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-C01-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680081 ID=EY680081; Name=EY680081; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGGAAAAAGAAGATTGAAGATGCAGTTCTTCGTGCTGAGAG
TTTAGCAACAACAGCACTAGAACTCGAGGAAGCAACAAGAATTAAGCAGG
AAGCGATGGTCCGTAACTATAACCTTTGGGATGACCCAACTAAATCCAAT
GAAGTTCTTGTCAAGCTAGCTGACAGTCTCAAAGTAGTTAATGCTCTCAA
AGATCTACGATATAAGGCTGAGGAAGCAAAGTTGATATCACAGTTGGCTG
AGATGGAAGCTATCGATTATGGGCTTTTCAAGCGAGCATACCGTGCATCT
TTAGATGTGAGCAAGCTATTGGATCAGTATGAGATGTCCAAGCTTCTTCG
TGGGCCAAATGACGTGGAAGGAGCATCTGTAACTATTAAAGCTGGATCAA
ATGGCATCTGTCCTGAGATATGGGCAGAACAACTTCTCAACATGTATGTT
AGATGGGCTGACAAGGAAGGATATAGAGGAAGGGTAGTTGATAAGTGTTG
CTGCAAGAATGGTGGTGTCAAGTCCGCAACTATTGAATTCGAATTTGAGT
ATGCTTTTGGCTATCTTTCCGGAGAGACAGGTGCTCACTGGCTCATTAAT
TTTCCGAATGGTTCTTTTCCTCATGGAGTAAAAACTACGGTTTCCATTCT
GGCTAAAGTTCAGAGGGTAACCCATTTTCTCTTCCCTGGAACCCAAAGCC
CCCCCAAAAACATTTCTGATTACTTTCCTAAAAAATCATTTTTTGGCCAA
AAGCTTCTAAAATCATTTTTTATTTCAAATTACCCTTTTTTTGGGGAATT
GTTTTTCCCAATGTGTATGCCCATTTAGTGCCCCCGGGTGACCCTTTTTT
TGTTAAATATAAAATTGAATTTTTGTCTGAGGAACACATTAACCAAG
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