EY680081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCTU (Peptide chain release factor 2 OS=Mycobacterium tuberculosis GN=prfB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.822e-18 Identity = 61/204 (29.90%), Postives = 98/204 (48.04%), Query Frame = 1 Query: 94 KQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKL---LDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 K E + +LWDD T++ V +L+ + + +++LR + ++ ++ +LA EA A ++ L ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA++ Y V D + G+KSAT +A+G LS E G H L+ F N S V +L V+ H P Sbjct: 34 KLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRLDDLPVLYELAAEEA-GAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIP 236
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCBO (Peptide chain release factor 2 OS=Mycobacterium bovis GN=prfB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.822e-18 Identity = 61/204 (29.90%), Postives = 98/204 (48.04%), Query Frame = 1 Query: 94 KQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKL---LDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 K E + +LWDD T++ V +L+ + + +++LR + ++ ++ +LA EA A ++ L ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA++ Y V D + G+KSAT +A+G LS E G H L+ F N S V +L V+ H P Sbjct: 34 KLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRLDDLPVLYELAAEEA-GAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIP 236
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_STRCO (Peptide chain release factor 2 OS=Streptomyces coelicolor GN=prfB PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18 Identity = 60/188 (31.91%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTH 675 +LWDDP + ++ KL+ V + LR + ++ ++ ++AE E D A V K LD+ E+ LL G D A V I+A + G+ +AE+L MY+RWA++ GY+ V + + G+KS T + YA+G LS E G H L+ F N V IL V++ H Sbjct: 44 SLWDDPEAAQKITSKLSHLQAEVRKAEALRGRIDDLGVLFEMAEEED-DPDTRAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVEQTDH 230
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_PROMH (Peptide chain release factor 2 OS=Proteus mirabilis (strain HI4320) GN=prfB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18 Identity = 62/209 (29.67%), Postives = 104/209 (49.76%), Query Frame = 1 Query: 13 KKKIEDAVLRAESXXXXXXXXXXXXRIKQ-EAMVRNYNLWDDPTKSNEVLVKLADSLK-VVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPH 624 K KIE+ R + R+++ A + ++W++P K+ + L K SL+ +V + L E+ + LA +EA D F A ++K L+Q E ++ G D + ++AGS G + WA L+ MY+RWA+ G++ ++++ G+KSATI+ EYA+G+L ETG H L+ F +G H Sbjct: 8 KHKIEEVAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKA-QALGKERSSLEAIVETIDQLEQGLEDVSGLLDLA-VEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRH 214
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCUA (Peptide chain release factor 2 OS=Mycobacterium ulcerans (strain Agy99) GN=prfB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18 Identity = 65/209 (31.10%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 94 KQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEME---AIDYGLFK-----RAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 K E + LWDD T++ V +L+ + + +++LR + E+ ++ +LA E A L + +A RA ++ + E+ LL G D A VTI++G+ G+ WAE L+ MYVRWA++ Y V D + G+KSAT +A+G LS E G H L+ F N S V +L V+ H P Sbjct: 34 KLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEELRRRLEDLPVLYELAAEEEGAAAGEALTEADAEFKALRADIEAT------EVRTLLSGEYDEREALVTIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIP 236
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCMM (Peptide chain release factor 2 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=prfB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18 Identity = 65/209 (31.10%), Postives = 100/209 (47.85%), Query Frame = 1 Query: 94 KQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEME---AIDYGLFK-----RAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 K E + LWDD T++ V +L+ + + +++LR + E+ ++ +LA E A L + +A RA ++ + E+ LL G D A VTI++G+ G+ WAE L+ MYVRWA++ Y V D + G+KSAT +A+G LS E G H L+ F N S V +L V+ H P Sbjct: 34 KLEHEASDPKLWDDQTRAQRVTSELSHTQGELRRVEELRRRLEDLPVLYELAAEEEGAAAGEALAEADAEFKALRADIEAT------EVRTLLSGEYDEREALVTIRSGAGGVDAADWAEMLMRMYVRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIP 236
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_STRAW (Peptide chain release factor 2 OS=Streptomyces avermitilis GN=prfB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18 Identity = 59/188 (31.38%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 121 NLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTH 675 +LWDDP + ++ KL+ V + LR + ++ ++ ++AE E D A V K LD+ E+ LL G D A V I+A + G+ +AE+L MY+RWA++ GY+ + + + G+KS T + YA+G LS E G H L+ F N V IL V+ H Sbjct: 44 SLWDDPEAAQKITSKLSHLQAEVRKAEALRGRIDDLSVLFEMAEEED-DPDTRAEAESELTAVKKALDEMEVRTLLSGEYDSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAVQVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVVETTDH 230
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_PASMU (Peptide chain release factor 2 OS=Pasteurella multocida GN=prfB PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18 Identity = 57/196 (29.08%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 13 KKKIEDAVLRAESXXXXXXXXXXXXRIKQ-EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 + KI D R + R+++ A + ++W++P K+ + + VVN + L E+ + + +LA +EA D F A ++ + L + E ++ G +D V ++AGS G + W E LL MY+RWA+ +G++ +++ G+KSATI+ EYAFG+L ETG H L+ Sbjct: 8 RNKISDLTERTQVLRGYLDFDAKVERLEEVNAELEQPDVWNEPEKAQALGKERVALEGVVNTIHTLDQGLEDVEGLLELA-IEAEDEATFHEAVAELEELEQQLAKLEFRRMFSGQHDAADCYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGIKSATIKVSGEYAFGWLRTETGIHRLV 202
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_STAHJ (Peptide chain release factor 2 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=prfB PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17 Identity = 52/166 (31.33%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 100 EAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKLLDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLI 597 E M+ + WDD K+ +V+ K VVN +L + E+ +L + E +D + + LD + +DQ+E+ LL GP+D A + + G+ G + WA LL MY R+ +++G++ VD GVKS T+ + A+GYL E G H L+ Sbjct: 37 EEMMTEPDFWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQ-EELDGDVKSDLEQNVLDFKEKVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLV 201
BLAST of EY680081 vs. ExPASy Swiss-Prot
Match: RF2_MYCA1 (Peptide chain release factor 2 OS=Mycobacterium avium (strain 104) GN=prfB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17 Identity = 60/204 (29.41%), Postives = 97/204 (47.55%), Query Frame = 1 Query: 94 KQEAMVRNYNLWDDPTKSNEVLVKLADSLKVVNALKDLRYKAEEAKLISQLAEMEAIDYGLFKRAYRASLDVSKL---LDQYEMSKLLRGPNDVEGASVTIKAGSNGICPEIWAEQLLNMYVRWADKEGYRGRVVDKCCCKNGGVKSATIEFEFEYAFGYLSGETGAHWLIN---FPNGSFPHGVKTTVSILAKVQRVTHFLFP 687 K E + LWDD ++ V +L+ + + +++LR + ++ ++ +LA E G + A ++ L ++ E+ LL G D A VTI++G+ G+ WAE L+ MY+RWA++ Y V D + G+KSAT +A+G LS E G H L+ F N S V +L V+ H P Sbjct: 34 KLEHEASDPQLWDDQARAQRVTSELSHAQGELRRIEELRARLDDLPVLYELAAEEG--EGAAEALAEADAELKALRADIEATEVRTLLSGEYDEREALVTIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIP 235 The following BLAST results are available for this feature:
BLAST of EY680081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680081 ID=EY680081; Name=EY680081; organism=Citrus sinensis; type=EST; length=897bpback to top |