DR911979

Overview
NameDR911979
Unique NameDR911979
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length209
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.098e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 2
Query:    5 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILL 202
            RLL+Y +MPNGSL  LLH  +  G S+DW  R +I +GAA+G A+LHH+C P I+HR+I +  IL+
Sbjct:  864 RLLMYDYMPNGSLGSLLH--ERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILI 927          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.098e-13
Identity = 30/66 (45.45%), Postives = 46/66 (69.70%), Query Frame = 2
Query:    8 LLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 205
            L++Y++MP GSLYD+LH        +DW  R  +A+G A G A+LH++C+P I+HR+I  + IL+D
Sbjct:  898 LMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMD 963          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.579e-13
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 2
Query:    2 ERLLVYKHMPNGSLYDLLHPADDT--GKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 208
            ERLLVY++M  GSL  +LH       G  ++W  R KIAIGAARG A+LHH+C P IIHR++ S  +LLD+
Sbjct:  927 ERLLVYEYMKWGSLETVLHEKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDE 997          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.674e-13
Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 2
Query:    2 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 208
            +RLLVY++  NG+L D LH  D+  K + W  R+ +A+GAAR   +LH  C P IIHRN  S  +LLDD
Sbjct:  555 QRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDD 623          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.105e-13
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 2
Query:    2 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 205
            E+LLVY++M NGSL   L       + +DW +RLKIA+GAARG A+LHH   P IIHR+I +  ILLD
Sbjct:  985 EKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLD 1052          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.973e-13
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 2
Query:    2 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 208
            E++LVY+++PNGSL D L  +   G  +DW RRLKIA+G+ +G A+LH   +P IIHR++ S  ILLD+
Sbjct:  702 EQMLVYEYIPNGSLRDGL--SGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDE 768          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.973e-13
Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 2
Query:    2 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 208
            E+LL+Y ++PN SL+DLLH +     +++W RR KIA+G ARG A+LH      IIH NI SK +L+DD
Sbjct:  442 EKLLIYDYLPNISLHDLLHESKPRKPALNWARRHKIALGIARGLAYLHTGQEVPIIHGNIRSKNVLVDD 510          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.041e-12
Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 2
Query:    5 RLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLD 205
            R+LVY++M NGSL D LH + D  K +DW  RL+IA  AA+G  +LH  CNP IIHR++ S  ILLD
Sbjct:  675 RILVYEYMHNGSLGDHLHGSSDY-KPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLD 740          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.041e-12
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 2
Query:    2 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 208
            +RLLVY+++ NG+L D LH  DD   ++ W  R+K+A+G A+   +LH  C P I+HRN  S  ILLD+
Sbjct:  465 QRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDE 533          
BLAST of DR911979 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.041e-12
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 2
Query:    2 ERLLVYKHMPNGSLYDLLHPADDTGKSVDWPRRLKIAIGAARGFAWLHHNCNPRIIHRNISSKCILLDD 208
            +RLL+Y  M NGSL   LH   D   ++ W  RLKIA GAARG A+LH  C P +IHR++ S  ILLD+
Sbjct:  822 DRLLIYSFMENGSLDYWLHERVDGNMTLIWDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDE 890          
The following BLAST results are available for this feature:
BLAST of DR911979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
RCH2_ARATH2.098e-1353.03Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PEPR1_ARATH2.098e-1345.45Leucine-rich repeat receptor-like protein kinase P... [more]
BRL1_ARATH3.579e-1353.52Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
SRF3_ARATH4.674e-1349.28Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
EXS_ARATH6.105e-1354.41Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y5977_ARATH7.973e-1350.72Probable leucine-rich repeat receptor-like protein... [more]
TMKL1_ARATH7.973e-1350.72Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
Y1677_ARATH1.041e-1255.22Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH1.041e-1246.38Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
PSKR2_ARATH1.041e-1252.17Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_20107 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-25_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911979 ID=DR911979; Name=DR911979; organism=Citrus sinensis; type=EST; length=209bp
GGAGAGGCTTTTGGTTTACAAGCACATGCCAAATGGTAGCCTTTATGATC
TTTTACATCCCGCTGATGACACTGGCAAGAGTGTGGATTGGCCACGGAGG
CTCAAAATAGCTATAGGGGCAGCTAGAGGATTTGCCTGGCTACATCATAA
CTGCAATCCTCGTATTATTCACCGAAATATTAGCTCTAAATGCATCTTAC
TGGATGATG
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