DR911825

Overview
NameDR911825
Unique NameDR911825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length237
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.919e-24
Identity = 58/75 (77.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKSVVASGLARRC+VQVSYAIGVPEPLSVFVDTY TGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.919e-24
Identity = 56/75 (74.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYI RQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  257 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 331          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.919e-24
Identity = 58/75 (77.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKSVVASGLARRC+VQVSYAIGVPEPLSVFVDTY TGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.731e-24
Identity = 57/75 (76.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VAS LARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  255 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 329          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.731e-24
Identity = 55/75 (73.33%), Postives = 60/75 (80.00%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AY+VRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI
Sbjct:  255 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKI 329          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK4_ATRNU (S-adenosylmethionine synthetase 4 OS=Atriplex nummularia GN=SAMS4 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.731e-24
Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYI RQAAKS+VA+GLARRC+VQ+SYAIGVPEPLSVFVDTYGTGKI
Sbjct:  258 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKI 332          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.731e-24
Identity = 57/75 (76.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKSVVA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTG I
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGMI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.731e-24
Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYI RQAAKS+VA+GLARRC+VQ+SYAIGVPEPLSVFVDTYGTGKI
Sbjct:  258 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVPEPLSVFVDTYGTGKI 332          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK2_PEA (S-adenosylmethionine synthetase 2 OS=Pisum sativum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.731e-24
Identity = 56/75 (74.67%), Postives = 60/75 (80.00%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVR+AAKS+VA+GLARRCLVQVSYAIGVPEPLSVFVD+YGTGKI
Sbjct:  256 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVREAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKI 330          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.731e-24
Identity = 56/75 (74.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYI RQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVD+YGTGKI
Sbjct:  256 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKI 330          
The following BLAST results are available for this feature:
BLAST of DR911825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_POPTR5.919e-2477.33S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK3_ORYSJ5.919e-2474.67S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK1_VITVI5.919e-2477.33S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK_PHALU7.731e-2476.00S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK_MEDTR7.731e-2473.33S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK4_ATRNU7.731e-2473.33S-adenosylmethionine synthetase 4 OS=Atriplex numm... [more]
METK3_PETHY7.731e-2476.00S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK3_ATRNU7.731e-2473.33S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK2_PEA7.731e-2474.67S-adenosylmethionine synthetase 2 OS=Pisum sativum... [more]
METK2_ORYSJ7.731e-2474.67S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_19953 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-38_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911825 ID=DR911825; Name=DR911825; organism=Citrus sinensis; type=EST; length=237bp
CACGAGGGGGGGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGG
TGGCGGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTG
CATATATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCC
CGTCGCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCT
GTCTGTGTTTGTGGACACTTATGGTACAGGAAAGATT
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