DR911825

Overview
NameDR911825
Unique NameDR911825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length237
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.319e-23
Identity = 55/75 (73.33%), Postives = 60/75 (80.00%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVP+PLSVFVD+YGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGKI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK1_TRIMO (S-adenosylmethionine synthetase 1 OS=Triticum monococcum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.319e-23
Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYI RQAAKS++ASGLARRC+VQ+SYAIGVPEPLSVFVD+YGTGKI
Sbjct:  256 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKI 330          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.319e-23
Identity = 54/75 (72.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYI RQAAKS++ASGLARRC+VQ+SYAIGVPEPLSVFVD+YGTGKI
Sbjct:  256 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKI 330          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.722e-23
Identity = 55/75 (73.33%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLS+FVDTYGTG I
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.722e-23
Identity = 56/75 (74.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRCLVQVSYAIGVPEPLSVFVD+YGTG I
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGTI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.249e-23
Identity = 56/75 (74.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARR +VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.249e-23
Identity = 56/75 (74.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARR +VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.938e-23
Identity = 55/75 (73.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AY+ RQAAKS+VAS LARRC+VQVSYAIGVPEPLSVFVDTYGTGKI
Sbjct:  255 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKI 329          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.938e-23
Identity = 58/75 (77.33%), Postives = 58/75 (77.33%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKSVVASGLARRCLVQVSYAIGV EPLSVFVDTY TGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVAEPLSVFVDTYKTGKI 328          
BLAST of DR911825 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.837e-23
Identity = 56/75 (74.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:   13 IIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKI 237
            IIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARR +VQVSYAIGVPEPLSVFVD+YGTGKI
Sbjct:  254 IIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKI 328          
The following BLAST results are available for this feature:
BLAST of DR911825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ELAUM1.319e-2373.33S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK1_TRIMO1.319e-2372.00S-adenosylmethionine synthetase 1 OS=Triticum mono... [more]
METK1_HORVU1.319e-2372.00S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK_PINBN1.722e-2373.33S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK3_PICSI1.722e-2374.67S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK2_SUASA2.249e-2374.67S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_BETVU2.249e-2374.67S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK_MUSAC2.938e-2373.33S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK1_ACTCH2.938e-2377.33S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK4_ARATH3.837e-2374.67S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_19953 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-38_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR911825 ID=DR911825; Name=DR911825; organism=Citrus sinensis; type=EST; length=237bp
CACGAGGGGGGGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGG
TGGCGGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTG
CATATATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCC
CGTCGCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCT
GTCTGTGTTTGTGGACACTTATGGTACAGGAAAGATT
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