FC871195

Overview
NameFC871195
Unique NameFC871195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_DROAZ (60S ribosomal protein L32 OS=Drosophila azteca GN=RpL32 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.473e-33
Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 3
Query:    3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            K R+PKG D R RR+ KG+ LMPNIGYGS+K+TRH LP GFKKF+VHN  ELE+L+M NR YC EIAH VS+KKRKEI ERA QL + +TN   RLRSQE E
Sbjct:   33 KWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_DROAI (60S ribosomal protein L32 OS=Drosophila affinis GN=RpL32 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.473e-33
Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 3
Query:    3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            K R+PKG D R RR+ KG+ LMPNIGYGS+K+TRH LP GFKKF+VHN  ELE+L+M NR YC EIAH VS+KKRKEI ERA QL + +TN   RLRSQE E
Sbjct:   33 KWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_DROSU (60S ribosomal protein L32 OS=Drosophila subobscura GN=RpL32 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.536e-33
Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 3
Query:    3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            K R+PKG D R RR+ KG+ LMPNIGYGS+K+TRH LP GFKKF+VHN  ELE+L+M NR YC EIAH VS+KKRKEI ERA QL + +TN   RLRSQE E
Sbjct:   33 KWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_DROMD (60S ribosomal protein L32 OS=Drosophila madeirensis GN=RpL32 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.536e-33
Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 3
Query:    3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            K R+PKG D R RR+ KG+ LMPNIGYGS+K+TRH LP GFKKF+VHN  ELE+L+M NR YC EIAH VS+KKRKEI ERA QL + +TN   RLRSQE E
Sbjct:   33 KWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_DROGU (60S ribosomal protein L32 OS=Drosophila guanche GN=RpL32 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.536e-33
Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 3
Query:    3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            K R+PKG D R RR+ KG+ LMPNIGYGS+K+TRH LP GFKKF+VHN  ELE+L+M NR YC EIAH VS+KKRKEI ERA QL + +TN   RLRSQE E
Sbjct:   33 KWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_DROBF (60S ribosomal protein L32 OS=Drosophila bifasciata GN=RpL32 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 4.536e-33
Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 3
Query:    3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            K R+PKG D R RR+ KG+ LMPNIGYGS+K+TRH LP GFKKF+VHN  ELE+L+M NR YC EIAH VS+KKRKEI ERA QL + +TN   RLRSQE E
Sbjct:   33 KWRKPKGIDNRVRRRFKGQYLMPNIGYGSNKRTRHMLPTGFKKFLVHNVRELEVLLMQNRIYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_RAT (60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.320e-32
Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 3
Query:    9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            R+P+G D R RR+ KG+ LMPNIGYGS+KKT+H LP+GF+KF+VHN  ELE+L+M N++YCAEIAHNVS+K RK I ERAAQL + VTN  ARLRS+E E
Sbjct:   36 RKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_PIG (60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 1.320e-32
Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 3
Query:    9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            R+P+G D R RR+ KG+ LMPNIGYGS+KKT+H LP+GF+KF+VHN  ELE+L+M N++YCAEIAHNVS+K RK I ERAAQL + VTN  ARLRS+E E
Sbjct:   36 RKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_MOUSE (60S ribosomal protein L32 OS=Mus musculus GN=Rpl32 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.320e-32
Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 3
Query:    9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            R+P+G D R RR+ KG+ LMPNIGYGS+KKT+H LP+GF+KF+VHN  ELE+L+M N++YCAEIAHNVS+K RK I ERAAQL + VTN  ARLRS+E E
Sbjct:   36 RKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_MACFA (60S ribosomal protein L32 OS=Macaca fascicularis GN=RPL32 PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 1.320e-32
Identity = 67/100 (67.00%), Postives = 83/100 (83.00%), Query Frame = 3
Query:    9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308
            R+P+G D R RR+ KG+ LMPNIGYGS+KKT+H LP+GF+KF+VHN  ELE+L+M N++YCAEIAHNVS+K RK I ERAAQL + VTN  ARLRS+E E
Sbjct:   36 RKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
The following BLAST results are available for this feature:
BLAST of FC871195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
RL32_DROAZ3.473e-3367.6560S ribosomal protein L32 OS=Drosophila azteca GN=... [more]
RL32_DROAI3.473e-3367.6560S ribosomal protein L32 OS=Drosophila affinis GN... [more]
RL32_DROSU4.536e-3367.6560S ribosomal protein L32 OS=Drosophila subobscura... [more]
RL32_DROMD4.536e-3367.6560S ribosomal protein L32 OS=Drosophila madeirensi... [more]
RL32_DROGU4.536e-3367.6560S ribosomal protein L32 OS=Drosophila guanche GN... [more]
RL32_DROBF4.536e-3367.6560S ribosomal protein L32 OS=Drosophila bifasciata... [more]
RL32_RAT1.320e-3267.0060S ribosomal protein L32 OS=Rattus norvegicus GN=... [more]
RL32_PIG1.320e-3267.0060S ribosomal protein L32 OS=Sus scrofa GN=RPL32 P... [more]
RL32_MOUSE1.320e-3267.0060S ribosomal protein L32 OS=Mus musculus GN=Rpl32... [more]
RL32_MACFA1.320e-3267.0060S ribosomal protein L32 OS=Macaca fascicularis G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DC06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DC06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871195 ID=FC871195; Name=FC871195; organism=Citrus sinensis; type=EST; length=484bp
AAAAAGGGCGAAGGCCGAAGGGAAACGACCCACGAGCCAGGAGAAAGCCC
AAAGGACGTCCTCTGATGCCCAATATTGGCTACGGCTCGGACAAGAAAAC
ACGCCACTATCTGCCCAATGGATTCAAGAAGTTTGTTGTGCACAATGCCA
ATGAACTGGAACTCTTGATGATGCACAACAGGACTTATTGCGCTGAGATA
GCCCACAACGTATCAACCAAGAAGAGAAAGGAGATTGACGAGCGCGCTGC
ACAATTGGATGTTGTGGTCACCAACAAATTGGCCAGGTTGCGCAGCCAGG
AGGAGGAGTAAAAATTGGTTTCTATATTTTATGTTAGTGTTTGCTTTTGG
CCAAATGTTTCCTAGGTTGTCTTTGGAATGGATGAACATTTCCAGGGTTG
AATTATGATGTATTTTCTATTTTTGTCACCTGAATGATATTTTGAATTTG
TTGTTTTTTGCGGAGCATGATTAATGTTATGTCA
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