FC871195
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_YEAST (60S ribosomal protein L32 OS=Saccharomyces cerevisiae GN=RPL32 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 5.383e-18 Identity = 47/94 (50.00%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARL 290 R+ KG D RR+ +G P IGYGS+KKT+ P+G K F+V N +LE L MH +TY AEIAHN+S K R I RA L + VTN RL Sbjct: 33 RKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 5.952e-17 Identity = 43/94 (45.74%), Postives = 64/94 (68.09%), Query Frame = 3 Query: 9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARL 290 R+ KG D RR+ +G PNIGYGS+KKT+ P G+K ++V N +L++L++H ++Y AEIA +VS++KR EI +A +L V VTN +L Sbjct: 34 RKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_CANGA (60S ribosomal protein L32 OS=Candida glabrata GN=RPL32 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.326e-16 Identity = 46/94 (48.94%), Postives = 58/94 (61.70%), Query Frame = 3 Query: 9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARL 290 R+ KG D RR+ +G P IGYGS+KKT+ P+G K +V N +LE L MH ++Y AEIAHNVS+K R + RA L V VTN RL Sbjct: 34 RKQKGIDSVVRRRFRGNISEPTIGYGSNKKTKFMSPSGHKVVLVSNLKDLETLTMHTKSYAAEIAHNVSSKNRVTLLARAKALGVKVTNAKGRL 127
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_ENCCU (60S ribosomal protein L32 OS=Encephalitozoon cuniculi GN=RPL32 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.039e-16 Identity = 45/100 (45.00%), Postives = 58/100 (58.00%), Query Frame = 3 Query: 9 RRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308 RRP G D + R++ KG MP+I Y K+ RH LPNG +K + N N+L L NR YC EIAH V +KR I RA +L + + N ARL + EE Sbjct: 40 RRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARLIPEIEE 139
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_METKA (50S ribosomal protein L32e OS=Methanopyrus kandleri GN=rpl32 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.716e-14 Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTN 275 K RRPKG + RRK K +P MPN GYGS KK R P+G+++ +V+N +LE + + A IA V +KR+EI E+A +L +VV N Sbjct: 42 KWRRPKGRHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDLE--KIDPKRQAARIASRVGRRKRQEILEKAEELGIVVLN 130
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_PYRFU (50S ribosomal protein L32e OS=Pyrococcus furiosus GN=rpl32e PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.372e-13 Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTN 275 K RRPKG D + R K KG+P P+IG+ S K R P+G+++ +VHN ELE L + A IAH V KKR EI +RA +L + V N Sbjct: 39 KWRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYEEVLVHNVKELEAL--DPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLN 127
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_PYRHO (50S ribosomal protein L32e OS=Pyrococcus horikoshii GN=rpl32e PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.057e-13 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTN 275 K RRPKG D + R K KG+P P+IG+ S + R P+G+++ ++HN ELE L R A IAH V KKR EI +RA +L + V N Sbjct: 39 KWRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELERL--DPRRQAARIAHTVGKKKRIEILKRAEELGIKVLN 127
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_PYRAB (50S ribosomal protein L32e OS=Pyrococcus abyssi GN=rpl32e PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.810e-13 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTN 275 K RRPKG D + R K KG+P P+IG+ S + R P+G+++ ++HN ELE L + A IAH V KKR EI +RA +L + V N Sbjct: 39 KWRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELEKL--DPKRQAARIAHTVGKKKRIEILKRAQELGIKVLN 127
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_MAIZE (60S ribosomal protein L32 (Fragment) OS=Zea mays GN=RPL32 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.765e-12 Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 3 Query: 183 TYCAEIAHNVSTKKRKEIDERAAQLDVVVTNKLARLRSQEEE 308 TYCAEIAHNVSTKKRKEI ERAAQLD+VV KLAR SQE+E Sbjct: 1 TYCAEIAHNVSTKKRKEIVERAAQLDIVVPTKLARAPSQEDE 42
BLAST of FC871195 vs. ExPASy Swiss-Prot
Match: RL32_THEGJ (50S ribosomal protein L32e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl32e PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.191e-11 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 3 KGRRPKGNDPRARRKPKGRPLMPNIGYGSDKKTRHYLPNGFKKFVVHNANELELLMMHNRTYCAEIAHNVSTKKRKEIDERAAQLDVVVTN 275 K RRPKG D + R K KG+P P+IG+ S + R P+G+++ +VHN ELE + A IA V +KR+ I RA +L + V N Sbjct: 37 KWRRPKGIDSKMRLKKKGKPRSPSIGWSSPRAVRGLHPSGYEEVLVHNVKELEAI--DPTRQAARIARTVGARKREAIIARAKELGIKVLN 125 The following BLAST results are available for this feature:
BLAST of FC871195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871195 ID=FC871195; Name=FC871195; organism=Citrus sinensis; type=EST; length=484bpback to top |