FC871191

Overview
NameFC871191
Unique NameFC871191
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSI (Sucrose transport protein 2 OS=Oryza sativa subsp. indica GN=SUT2M PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.347e-24
Identity = 52/98 (53.06%), Postives = 73/98 (74.49%), Query Frame = 1 
Query:  106 PPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLP 399
            PP G+ + +L +FT+LG P AIT+S+P+AMA+        GQGL++G+LNLAIV+PQ++VSL SGP+D + GGGN PAF V A A+ + G+VA+  LP
Sbjct:  392 PPTGIVIASLVVFTILGAPLAITYSIPYAMAASRVENLGLGQGLAMGILNLAIVIPQVIVSLGSGPWDQLFGGGNAPAFAVAAAASFIGGLVAILGLP 489
[Close]
BLAST of FC871191 vs. ExPASy Swiss-Prot
Match: SUC3_ARATH (Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23
Identity = 51/109 (46.79%), Postives = 79/109 (72.48%), Query Frame = 1 
Query:   85 GATHILPPPVGVKVGALAIFTVLGIPQAITFSVPFAMASIFSRTSAAGQGLSLGVLNLAIVVPQMLVSLLSGPFDAVCGGGNMPAFMVGAVAAALSGIVALTLLPSTTA 411
            G  +I+      +  A+ +F +LG P AIT+SVPF++ +  +  S  GQGL++GVLNLAIV+PQM+VSL +GP+D + GGGN+PAF++ +VAA  +G++AL  LP+ ++
Sbjct:  476 GIEYIMRGNETTRTAAVIVFALLGFPLAITYSVPFSVTAEVTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDQLFGGGNLPAFVLASVAAFAAGVIALQRLPTLSS 584
The following BLAST results are available for this feature:
BLAST of FC871191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SUT2_ORYSI2.347e-2453.06Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]
SUC3_ARATH7.549e-2346.79Sucrose transport protein SUC3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DC02FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DC02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871191 ID=FC871191; Name=FC871191; organism=Citrus sinensis; type=EST; length=708bp
TTCTTGTTGGCGCTTTCTTTGGCTTTCACCTTTTTGATTACCAAATTGGC
CGAGTCCAACCGCCGGTCCGTCACCACAGCAGGCGGCGCCACCCATATCT
TGCCGCCGCCGGTTGGTGTGAAAGTTGGCGCTTTGGCTATCTTCACTGTG
TTGGGAATTCCTCAAGCTATTACTTTCAGCGTTCCGTTTGCTATGGCATC
CATATTTTCTAGAACTTCTGCTGCTGGTCAAGGGCTTTCGTTGGGTGTTT
TGAATCTTGCAATAGTTGTTCCACAGATGCTGGTGTCTTTACTTAGCGGA
CCCTTTGATGCCGTTTGCGGAGGTGGCAACATGCCGGCCTTTATGGTCGG
CGCAGTTGCGGCTGCCTTAAGTGGTATCGTTGCACTCACCCTGCTCCCAT
CAACAACCGCGGATGTTCCCCCGCCGATAACTGAAGCCGGAACTGCAACC
GCAAATCAAACTAATAAGCTCTAGCTAGTCTTAGTTTGTTGGAAGAAAAG
AAGGGACAGACTTTTACTTTTTTTTTAAGTCATCCGAAATGTGCCTAACC
CCTGAGTATCTTTGGGAAAATAATTCTGCTGGTAAGTAAATGAATGTGGT
GCATGGCTGCAAGGCTTGTGTGTGTATGGAGTTTAAATGTATGTTGTTAC
TTGTAAGTGAGTGAAATAATTGACAAGGTGTTTGTTCGTAAAAAAAAAAA
AAAAAAAA
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