FC871173

Overview
NameFC871173
Unique NameFC871173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 211
            LAKQ FDEAI+ELD+L EESYKDSTLIMQLLRDNLTLW SD+ +E G    GDE++  S    HE +E K
Sbjct:  197 LAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWNSDINDEAG----GDEIKEAS---KHEPEEGK 259          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 154
            LAKQ FD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSD  E+GG++ K
Sbjct:  200 LAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDNAEDGGDEIK 250          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14331_ORYSJ (14-3-3-like protein GF14-A OS=Oryza sativa subsp. japonica GN=GF14A PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16
Identity = 39/51 (76.47%), Postives = 47/51 (92.16%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 154
            LAKQ FDEAI+ELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++GG++ +
Sbjct:  205 LAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGGDEMR 255          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16
Identity = 47/70 (67.14%), Postives = 52/70 (74.29%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 211
            LAKQVFDEAI+ELDSL+EESYKDSTLIMQLLRDNLTLWTSD       QS  +E  A +    +EH E K
Sbjct:  195 LAKQVFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDAEY---NQSAKEEAPAAAAASENEHPEPK 261          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16
Identity = 41/58 (70.69%), Postives = 48/58 (82.76%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAE 175
            LAKQ FD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+ E G E  +  + Q +
Sbjct:  196 LAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDISESGQEDQQQQQQQQQ 253          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 154
            LAKQ FDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K
Sbjct:  200 LAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 250          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 154
            LAKQ FDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K
Sbjct:  200 LAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 250          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14333_ARATH (14-3-3-like protein GF14 psi OS=Arabidopsis thaliana GN=GRF3 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 154
            LAKQ FD+AIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ +E G++ K
Sbjct:  196 LAKQAFDDAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMTDEAGDEIK 246          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 154
            LAKQ FDEAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ ++G ++ K
Sbjct:  195 LAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 245          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 84.3445 bits (207), Expect = 2.405e-16
Identity = 44/70 (62.86%), Postives = 52/70 (74.29%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES*PGMHEHQEEK 211
            LAKQ FD+AIAELD+L+EESYKDSTLIMQLLRDNLTLWTSD+ E G         QAE      +HQ+++
Sbjct:  196 LAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMSESG---------QAEDQQQQQQHQQQQ 256          
The following BLAST results are available for this feature:
BLAST of FC871173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
14337_ARATH1.410e-1665.7114-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14336_ORYSJ1.410e-1680.3914-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
14331_ORYSJ1.410e-1676.4714-3-3-like protein GF14-A OS=Oryza sativa subsp. ... [more]
RAD25_SCHPO1.842e-1667.14DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
BMH2_YEAST1.842e-1670.69Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
1433_PEA1.842e-1678.4314-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
1433A_VICFA1.842e-1678.4314-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
14333_ARATH1.842e-1678.4314-3-3-like protein GF14 psi OS=Arabidopsis thalia... [more]
14332_SOLLC1.842e-1678.4314-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
BMH1_YEAST2.405e-1662.86Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DB06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871173 ID=FC871173; Name=FC871173; organism=Citrus sinensis; type=EST; length=446bp
CCTGGCTAAACAAGTATTTGATGAGGCTATTGCTGAACTTGATAGCCTTA
ATGAAGAGTCCTACAAGGACAGCACCCTTATTATGCAGCTTCTTCGGGAT
AATCTCACCTTGTGGACCTCGGATCTACCGGAGGAGGGAGGTGAGCAATC
TAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGGGATGCATGAGCATC
AGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCTATTAGTATTAGTAG
TATAGGGATTGAAAGAACATTTGGCTTGTATAATACTTATTACATGTTTT
TAATTTCAGGTTGTTGTGCTATTTTCTGTTTACATATAATTGAGTTTGCT
ACTTCTCGTGATAGGACTTGCTATGCTATTTTAGTGCTAGTTTGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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