FC871173

Overview
NameFC871173
Unique NameFC871173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length446
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433T_BOVIN (14-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.738e-15
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDE 163
            LAK  FDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   E  + ++G E
Sbjct:  191 LAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAE 244          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 7.738e-15
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 160
            LAK  FDEAIAELD+LNEESYKDSTLIMQLLRDNLTLWTS+   E  + ++ D
Sbjct:  191 LAKSAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGEEADNAEAD 243          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 143G2_ONCMY (14-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 40/52 (76.92%), Postives = 46/52 (88.46%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGEQSK 154
            LAK  FD+AIAELD+LNE+SY+DSTLIMQLLRDNLTLWTSD   +EGGE +K
Sbjct:  196 LAKTAFDDAIAELDTLNEDSYQDSTLIMQLLRDNLTLWTSDQQDDEGGEGNK 247          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL-PEEGGE 145
            LAK  FD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   +EGGE
Sbjct:  196 LAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQZDDEGGE 244          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 143G1_DANRE (14-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSD-LPEEGGE 145
            LAK  FD+AIAELD+LNE+SYKDSTLIMQLLRDNLTLWTSD   +EGGE
Sbjct:  196 LAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDEGGE 244          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 160
            LAK  FDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  191 LAKAAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 243          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 160
            LAK  FDEAIAELD+LNE+SYKDSTLIMQLLRDNLTLWTS+   + G+  +G+
Sbjct:  191 LAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGE 243          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGE 145
            +AKQ F+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ E+  E
Sbjct:  201 MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 248          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGE 145
            +AKQ F+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ E+  E
Sbjct:  200 MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247          
BLAST of FC871173 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.011e-14
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 2
Query:    2 LAKQVFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGE 145
            +AKQ F+EAIAELD+L EESYKDSTLIMQLLRDNLTLWTSD+ E+  E
Sbjct:  200 MAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQEQMDE 247          
The following BLAST results are available for this feature:
BLAST of FC871173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
1433T_BOVIN7.738e-1574.0714-3-3 protein theta OS=Bos taurus GN=YWHAQ PE=2 S... [more]
1433B_XENTR7.738e-1573.5814-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
143G2_ONCMY1.011e-1476.9214-3-3 protein gamma-2 OS=Oncorhynchus mykiss PE=2... [more]
143G1_ONCMY1.011e-1481.6314-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]
143G1_DANRE1.011e-1481.6314-3-3 protein gamma-1 OS=Danio rerio GN=ywhag1 PE... [more]
143B1_ONCMY1.011e-1471.7014-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]
143B1_DANRE1.011e-1471.7014-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]
1433D_TOBAC1.011e-1479.1714-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14338_ARATH1.011e-1479.1714-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH1.011e-1479.1714-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3DB06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3DB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871173 ID=FC871173; Name=FC871173; organism=Citrus sinensis; type=EST; length=446bp
CCTGGCTAAACAAGTATTTGATGAGGCTATTGCTGAACTTGATAGCCTTA
ATGAAGAGTCCTACAAGGACAGCACCCTTATTATGCAGCTTCTTCGGGAT
AATCTCACCTTGTGGACCTCGGATCTACCGGAGGAGGGAGGTGAGCAATC
TAAAGGTGATGAAGTTCAAGCAGAGAGCTAGCCGGGGATGCATGAGCATC
AGGAGGAGAAATTGTGCTAGTTGGGTTCTAATATCTATTAGTATTAGTAG
TATAGGGATTGAAAGAACATTTGGCTTGTATAATACTTATTACATGTTTT
TAATTTCAGGTTGTTGTGCTATTTTCTGTTTACATATAATTGAGTTTGCT
ACTTCTCGTGATAGGACTTGCTATGCTATTTTAGTGCTAGTTTGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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