FC871159

Overview
NameFC871159
Unique NameFC871159
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871159 vs. ExPASy Swiss-Prot
Match: CP1B1_RAT (Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.668e-11
Identity = 50/228 (21.93%), Postives = 103/228 (45.18%), Query Frame = 1
Query:   49 PPGPWKLPVIGNLHQLAGSLPHHGLRDLSKKYGPLMLLQLGQVPTVIVSSPEVANEVMKAHDVIFASRPHFPAAQIMSYNYRDIILSPYSDSWKQLRKICVSEILS-------AKRVQSFQSVREAEVSYLINWISSKAGSVVNLTENVYSLMYGITSRAAFGYR-SRDQEAFVSVI---EEATKVISGFNIADIFPSIGLVQWLTGNKSQVEKLHQEADRIVENIIN 699
            PPGP+  P+IGN   + G   H     L+++YG +  ++LG  P V+++     ++ +     +FA RP F + +++S   R +    YS+ WK+ R+     + +       ++ +    ++ EA     +       G+ ++ T+ +   +  + S   FG R + D   F+ ++   EE  + +   ++ D+ P      WL    + V  + +E ++I  N  N
Sbjct:   51 PPGPFPWPLIGNAASV-GRASHLYFARLARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGGVFADRPPFASFRVVS-GGRSLAFGHYSERWKERRRAAYGTMRAFSTRHPRSRGLLEGHALGEARELVAVLVRRCAGGACLDPTQPIIVAVANVMSAVCFGCRYNHDDAEFLELLSHNEEFGRTVGAGSLVDVMP------WLQLFPNPVRTIFREFEQINRNFSN 270          
BLAST of FC871159 vs. ExPASy Swiss-Prot
Match: C520B_DICDI (Putative cytochrome P450 520B1 OS=Dictyostelium discoideum GN=cyp520b1 PE=5 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11
Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 1
Query:   55 GPWKLPVIGNLHQLAGSLPHHGLRDLSKKYGPLMLLQLGQVPTVIVSSPEVANEV-MKAHDVIFASRPHFPAAQIMSYNYRDIILSPYSDSWKQLRKICVSEILSAKRVQS-FQSVREAEVSYLI 423
            GPW LP+IG ++ L    P+  L  LSKKYG +  + LG+  +++VS PE+ NE+ +K HD  F +RP     ++ S NYR +     + +WK  R +  S     K + S   SV E +++ LI
Sbjct:   14 GPWSLPIIGGIY-LINDNPNRALTKLSKKYGGIYKIWLGESFSMVVSDPEIVNEIWVKQHD-NFINRPKNITHKMFSSNYRSLNFGD-NPNWKFNRSMASSHFTKTKLLSSKVTSVVEKKLNKLI 135          
BLAST of FC871159 vs. ExPASy Swiss-Prot
Match: CP241_CANFA (Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C41 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11
Identity = 58/235 (24.68%), Postives = 109/235 (46.38%), Query Frame = 1
Query:   28 NNRISNLPPGPWKLPVIGNLHQLAGSLPHHGLRDLSKKYGPLMLLQLGQVPTVIVSSPEVANEVMKAHDVIFASRPHFPAAQIMSYNYRDIILSPYSDSWKQLRKICVSEILSAKRVQS-FQSVREAEVSYLINWISSKAGSVVNLTENV----YSLMYGITSRAAFGYRSRDQEAFVSVIEEATKVISG--FNIADIFPSIGLVQWLTGNKSQVEKLHQEADRIVENIINEHKK 711
            ++R   LPPGP  LP IGN+ QL   + +  L +LSK YGP+  L  G  PTV++   +   E +      F++R  FP A+ +S  +  I  S   + WK++R+  ++ + +    +S  +S  + E  YL+  +        + T  +     +++  I  +  F Y  +    F+  + E  +++S       + FP+  L+ +L G+ + + K        +   I EH++
Sbjct:   23 SSRKGKLPPGPTPLPFIGNILQLDKDI-NKSLSNLSKAYGPVFTLYFGMKPTVVLHGYDAVKETLIDLGEEFSARGRFPIAEKVSGGHGIIFTS--GNRWKEMRRFALTTLRNLGMGKSDLESRVQEEACYLVEELRKTNALPCDPTFVLGCASCNVICSIIFQNRFDYTDQTLIGFLEKLNENFRILSSPWIQAYNSFPA--LLHYLPGSHNTIFKNFAFIKSYILEKIKEHQE 252          
BLAST of FC871159 vs. ExPASy Swiss-Prot
Match: CP21A_FELCA (Steroid 21-hydroxylase OS=Felis catus GN=CYP21 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.963e-11
Identity = 58/213 (27.23%), Postives = 100/213 (46.95%), Query Frame = 1
Query:   79 GNLHQLAGSLPHHGLRDLSKKYGPLMLLQLGQVPTVIVSSPEVANEVMKAHDVIFASRPHFPAAQIMSYNYRDIILSPYSDSWKQLRKICVSEILSAKRVQSFQSVREAEVSYLINWISSKAGSVVNLTENVYSLMYGITSRAAFGYRSRD-QEAFVSVIEEATKVISGFNI--ADIFPSIGLVQWLTGNKSQVEKLHQEADRIVENIINEHK 708
            G LH L   LP + L  L++K GP+  L+LG    V+++S     E +    V FA RP  P+ +++S +Y+D+ L  YS  WK  +K+  S +L   R  S + + E         + ++AG+ V + +    L   +     FG +      AF   +E+  K    ++I   DI P +    +      ++++  +  DRIVE  + +HK
Sbjct:   35 GFLHLLQPDLPIY-LLGLTQKLGPVYRLRLGLQDVVVLNSKRTIEEALIRRWVDFAGRPQMPSYKLVSQHYQDLSLGDYSLLWKAHKKLTRSALLLGIR-NSMEPLVEQLTQEFCERMRAQAGTPVAIQKEFSFLTCSVICCLTFGDKEDTLVHAFHDCVEDLMKSWEHWSIQVLDIVPFLRF--FPNPGLRRLKQALENRDRIVEKQLRQHK 243          
The following BLAST results are available for this feature:
BLAST of FC871159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
CP1B1_RAT4.668e-1121.93Cytochrome P450 1B1 OS=Rattus norvegicus GN=Cyp1b1... [more]
C520B_DICDI6.097e-1136.00Putative cytochrome P450 520B1 OS=Dictyostelium di... [more]
CP241_CANFA7.963e-1124.68Cytochrome P450 2C41 OS=Canis familiaris GN=CYP2C4... [more]
CP21A_FELCA7.963e-1127.23Steroid 21-hydroxylase OS=Felis catus GN=CYP21 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AD01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871159 ID=FC871159; Name=FC871159; organism=Citrus sinensis; type=EST; length=793bp
CTGAAACTAGAGAAGAAATCAGAAACCAATAACAGAATCTCAAATCTACC
ACCAGGACCATGGAAATTACCTGTAATAGGAAATTTGCACCAGCTGGCTG
GCTCCCTCCCCCATCATGGACTACGCGACCTGTCCAAGAAATACGGACCA
CTTATGCTTCTACAACTCGGGCAAGTTCCAACCGTTATTGTATCTTCCCC
TGAAGTTGCCAATGAAGTTATGAAAGCCCATGATGTTATCTTTGCATCCA
GGCCTCATTTTCCTGCAGCACAAATCATGTCTTATAATTATCGTGATATA
ATTTTATCACCATATAGTGACTCTTGGAAACAACTGCGAAAAATCTGTGT
GTCTGAGATTTTGAGCGCCAAAAGAGTCCAATCTTTCCAATCAGTAAGAG
AAGCAGAGGTATCTTATCTCATTAATTGGATTTCTTCAAAAGCTGGATCC
GTTGTTAACTTAACTGAGAACGTTTACTCATTAATGTACGGTATCACTTC
AAGGGCGGCCTTTGGATACAGATCCAGAGACCAAGAAGCATTTGTCTCAG
TTATAGAGGAAGCAACAAAAGTGATCTCAGGTTTTAATATTGCAGATATT
TTTCCTTCCATTGGATTGGTTCAGTGGCTTACTGGAAACAAGTCTCAGGT
GGAGAAGCTGCATCAAGAAGCTGACAGAATAGTTGAAAACATTATCAATG
AACATAAGAAGCGGAAGGAAACATTGAAGAATTGCAAGACTGGTGATGAT
GAAGATCTTGTTTGATGTTCTGTTGAAAATTCCAGGGCTCGGA
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