FC871145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.701e-25 Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 201 LGLADDP+ FAELKVKEIKNGRLAMF+ GFFVQAIVTGKGP+ENL DHLA+P NNA+AYAT F P Sbjct: 206 LGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25 Identity = 54/67 (80.60%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 201 LGLADDP+ FAELKVKEIKNGRLA FSMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P Sbjct: 185 LGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.287e-24 Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 204 LGLADDP+ FAELKVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 185 LGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22 Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 204 LGLA+D EAFAELKVKE+KNGRLAMFSMFGFFVQAIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 200 LGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.587e-17 Identity = 43/57 (75.44%), Postives = 48/57 (84.21%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 171 LGLA DPE A LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 209 LGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.877e-17 Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP-VNNNAWAYATNFVP 201 LGLADDP+ F ELKVKEIKNGRLAM M GF+ QAIVTG+GP+EN HL DP +N A T F P Sbjct: 54 LGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.486e-15 Identity = 37/57 (64.91%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 171 LG D ++ ELK+KEIKNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN Sbjct: 209 LGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14 Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 171 LG D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPVNNN Sbjct: 211 LGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.425e-12 Identity = 37/58 (63.79%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 171 LG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPLENLA HLADP +NN Sbjct: 175 LGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232
BLAST of FC871145 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.425e-12 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 1 LGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 171 LG + DP F ELKVKEIKNGRLA+ ++ GF V Q+ G GPLENLA HLADP +NN Sbjct: 176 LGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNN 233 The following BLAST results are available for this feature:
BLAST of FC871145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871145 ID=FC871145; Name=FC871145; organism=Citrus sinensis; type=EST; length=607bpback to top |