FC871134

Overview
NameFC871134
Unique NameFC871134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1125 contig Csv1_Contig1125:30..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.496e-43
Identity = 96/235 (40.85%), Postives = 136/235 (57.87%), Query Frame = 3
Query:   81 NVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +++NI++   FD  +K++   +C GKSFYT +AF+ AA+++  FG+ G     KRE+AAFFA  +HET               +CY+ E      YC  Q+ Q+PC PG+ YYGRGPIQ++ N NYG  G+AIG + L  P+ VA + VVSFK+A+WFWMT      + H V+                 G+G     ING +ECG    A+VQ RIG+Y+ YC+  GV+PG N+
Sbjct:   84 DISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYC-VQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNI 317          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.089e-42
Identity = 101/235 (42.98%), Postives = 132/235 (56.17%), Query Frame = 3
Query:   81 NVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +V++IV+   FD  + ++   +C  K FYT DAF+ AA A+P FG+ GS +  KRE+AAF A  +HET               +C+ +E   S+ YC   + Q+PC PGK YYGRGPIQL+ N NYG AG+AIG D L  P+ VA D  V FKTA+WFWMT      + H V+                 GFG     ING +ECG  Q ++V  RIG+YK YC+  GV  G NL
Sbjct:   24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTP-SAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNL 257          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.563e-42
Identity = 104/245 (42.45%), Postives = 133/245 (54.29%), Query Frame = 3
Query:   54 TFPTNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            T P++     VA+I++P  FD  + ++   +CA K FYT DAF+ AA AYP F + G  +  KRE+AAF A  +HET               +C+ EE N  +  YC E   ++PC  GK YYGRGPIQ+T N NYG AG+AIG D L  P+ VA D  VSFKTA WFWMT      + H V+                 G+G     ING VECG     +V  RIG+YK YC+  GV+ G NL
Sbjct:   66 TPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYC-EPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNL 309          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.653e-42
Identity = 97/235 (41.28%), Postives = 131/235 (55.74%), Query Frame = 3
Query:   81 NVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVNQ---------------GFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +++ +++   FD  +K++   +C  K FYT DAF+ AAKAYP FG+ G     KREIAAF    +HET               +C++ E N S  YC     Q+PC PG+ YYGRGPIQ++ N NYG  G+AIG D L  P+ VA D V+SFK+A+WFWMT      + H V+                 G+G     ING +ECG  Q ++VQ RIG++K YC+  GV  G NL
Sbjct:   75 DLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPST-YCSA-TPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNL 307          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.653e-42
Identity = 97/235 (41.28%), Postives = 131/235 (55.74%), Query Frame = 3
Query:   81 NVANIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVNQ---------------GFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +++ +++   FD + K++   +C  K FYT DAF+ AAKAYP FG+ G     KREIAAF    +HET               +C++ E N S  YC     Q+PC PG+ YYGRGPIQ++ N NYG  G+AIG D L  P+ VA D V+SFK+A+WFWMT      + H V+                 G+G     ING +ECG  Q ++VQ RIG++K YC+  GV  G NL
Sbjct:   74 DLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYCSA-TPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNL 306          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.037e-41
Identity = 96/235 (40.85%), Postives = 126/235 (53.62%), Query Frame = 3
Query:   81 NVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +V  +V    FD  +K +    CAG  FYT DAF+ AA+++  FG+ G     K+E+AAF A  +HET               +C++ E N    YC    K +PC PGK YYGRGPIQLT N NYG AG+AI  D +  P+ ++ +P VSFKTA+WFWMT      + H V+                 G+G     ING +ECG  Q  +V  R+G+YK YC  FGV PG NL
Sbjct:   79 DVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSP--KDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNL 311          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.775e-41
Identity = 93/234 (39.74%), Postives = 130/234 (55.56%), Query Frame = 3
Query:   84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +  I++   FD  +K++   +C  K FYT DAFL AAK++P FG+ GS +V KRE+AAF    +HET               +C+++E N S+ YC   + +YPC PGK YYGRGP+QL+ N NYG  G+A+  + L  P+ VA D V+SFKTA+WFWMT      + H V+                 G+G     +NG +ECG     QV  R+G+++ YC   GV  G NL
Sbjct:    2 IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYC-APSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNL 234          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.775e-41
Identity = 93/236 (39.41%), Postives = 131/236 (55.51%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAAS-CAGK-SFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            ++  +++   FD + N    + C GK +FY+ +AF++AA ++P FG+ G     KREIAAFFA  +HET               +C++ E      YC   N Q+PC PG+ Y+GRGPIQ++ N NYG  G+AIG D L  P+ VA D ++SFK+A+WFWMT      + H V+                 GFG     ING +ECG    ++VQ RIG+Y+ YC   GV+PG NL
Sbjct:   65 DLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSN-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNL 299          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.553e-40
Identity = 93/236 (39.41%), Postives = 130/236 (55.08%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            ++  +++   FD + N    + C GK+ FY+ +AF+ AA ++P FG+ G     KREIAAF A  +HET               +C++ E      YC   + Q+PC PG+ Y+GRGPIQ++ N NYG  G+AIG D L  P+ VA DPV+SFK+A+WFWMT      + H V+                 GFG     ING +ECG    ++VQ RIG+Y+ YC   GV+PG NL
Sbjct:   71 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENL 305          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.553e-40
Identity = 93/236 (39.41%), Postives = 131/236 (55.51%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAAS-CAGK-SFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            ++  +++   FD + N    + C GK +FY+ +AF++AA ++P FG+ G     KREIAAFFA  +HET               +C++ E      YC   + Q+PC PG+ Y+GRGPIQ++ N NYG  G+AIG D L  P+ VA D V+SFK+A+WFWMT      + H V+                 GFG     ING +ECG    ++VQ RIG+Y+ YC   GV+PG NL
Sbjct:   67 DLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNL 301          
The following BLAST results are available for this feature:
BLAST of FC871134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI3_TOBAC5.496e-4340.85Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI2_HORVU2.089e-4242.9826 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=... [more]
CHI3_ORYSJ3.563e-4242.45Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIT_PHAVU4.653e-4241.28Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI5_PHAVU4.653e-4241.28Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHIX_PEA1.037e-4140.85Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHIT_CARPA8.775e-4139.74Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI2_SOLTU8.775e-4139.41Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHIC_SOLLC2.553e-4039.41Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI1_SOLTU2.553e-4039.41Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAK2AB06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871134 ID=FC871134; Name=FC871134; organism=Citrus sinensis; type=EST; length=749bp
CTTAAGATGATATAAATATAGTACCCATTGCTCTTGAGGGCATTCTTGCC
CTAACTTTTCCCACCAATGTAATGTGTCAAAATGTTGCTAACATTGTGAC
TCCCCAGTTCTTCGACGGCATAAAGAATCAGGCAGCCGCGAGTTGTGCCG
GCAAGAGCTTCTACACGAGAGATGCGTTTCTGAATGCTGCCAAGGCTTAT
CCTCAATTTGGTAGCGGCTCTCCAGAAGTTTCGAAGCGTGAGATTGCTGC
ATTTTTTGCACACGTCACTCATGAAACTGGACATTTCTGCTACATAGAAG
AGATTAACAAGTCCAACAGGTACTGTGATGAACAAAACAAACAGTACCCA
TGTGTTCCCGGAAAGTTCTACTACGGCCGTGGACCGATCCAACTCACCGG
AAATGGCAACTACGGAGCTGCCGGAAAAGCCATCGGGTTTGACGGATTAA
GAGCTCCCGAAACGGTGGCCAAGGACCCCGTTGTGTCATTTAAGACTGCC
GTGTGGTTTTGGATGACCAATGTGCACCCAGTTGTGAACCAAGGTTTTGG
TGCAACAATTCAGAGAATCAATGGTGCCGTTGAATGCGGTGGCAAGCAAC
CTGCTCAGGTTCAAGCTCGCATTGGATATTATAAGGATTATTGCAACAAA
TTTGGTGTTGCTCCTGGCCCAAATCTCTTCTTGTTAAAATGTTTTCGCCG
ATACTTCACTGGTTTGTTGAAATAAGGTGGGGTAATTTTTATAATATAG
back to top