FC871134

Overview
NameFC871134
Unique NameFC871134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1125 contig Csv1_Contig1125:30..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40
Identity = 93/238 (39.08%), Postives = 126/238 (52.94%), Query Frame = 3
Query:   72 MCQNVANIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            + QN++++++   F+ I  ++   +C  K FYT +AF+ A K +  FG+ G      +EIAAF A  +HET               +CY  E      YC   ++Q+PC PGK Y+GRGPIQ++ N NYGAAG AIG + L  P+ VA D VVSFKTA+WFWMT      + H V+                 GFG     ING +EC     A +  RIG+Y+ YC   GV PG NL
Sbjct:    1 LSQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYC-ASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNL 237          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40
Identity = 100/236 (42.37%), Postives = 131/236 (55.51%), Query Frame = 3
Query:   84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKS--NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            VA+IV+   FD  + ++  A+C  K+FYT DAF+ AA A+P F + G     KRE+AAF A  +HET               +C+ EE N +  + YC  Q+ Q+PC  GK YYGRGPIQ++ N NYG AG+AIG + L  P+ VA D  VSFKTA WFWMT      + H V+                 G+G     ING VECG    ++V  RIG+YK YC+  GV+ G NL
Sbjct:   79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYC-VQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANL 313          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.428e-40
Identity = 93/234 (39.74%), Postives = 128/234 (54.70%), Query Frame = 3
Query:   84 VANIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            V +IV    F+ +  ++   +C  + FYT +AFL AA A+P FG +G+ E  KRE+AAF    +HET               +C+ +E N  + YC + + ++PC PG+ YYGRGPIQL+ N NYG AG+AIG D L  P+ VA D  VSFKTA+WFWMT      + H V+                 G+G     +NG +ECG     +V  RIG+Y+ YC  FG+  G NL
Sbjct:   89 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYC-QPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNL 321          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.702e-40
Identity = 91/235 (38.72%), Postives = 129/235 (54.89%), Query Frame = 3
Query:   84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            + N+++ + F+  + ++   +C  + FYT DAF+ AA+++P F + G     KREIAAF A  +HET                +CY  E+N  + YC   +  YPC PGK Y+GRGP+QL+ N NYG  G+AIG D L  P+ ++ DP +SFK+A WFWMT      + H V+                 G+G     ING +ECG    AQV+ RIG+YK YC+  GV+ G NL
Sbjct:   52 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNL 285          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.702e-40
Identity = 94/233 (40.34%), Postives = 128/233 (54.94%), Query Frame = 3
Query:   90 NIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +++T + FD  + ++    C  + FYT DAF+ AAK++P F + G     KRE+AAF A  +HET                +CY  E+N ++ YC + +  YPC PGK Y+GRGP+QLT N NYG  G+AIG D L  P+ +A DP +SFK+A WFWMT      + H V+                 GFG     ING +ECG    A+V+ RIG+YK YC+  GV  G NL
Sbjct:   74 SLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YC-QWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNL 304          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.267e-39
Identity = 92/236 (38.98%), Postives = 130/236 (55.08%), Query Frame = 3
Query:   81 NVANIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            ++  +++   FD + N    + C GK+ FY+ +AF++AA ++P FG+ G     KREIAAF A  +HET               +C++ E      YC   + Q+PC PG+ Y+GRGPIQ++ N NYG  G+AIG D L  P+ VA D V+SFK+A+WFWMT      + H V+                 GFG     ING +ECG    ++VQ RIG+Y+ YC   GV+PG NL
Sbjct:   67 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNL 301          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.267e-39
Identity = 91/235 (38.72%), Postives = 129/235 (54.89%), Query Frame = 3
Query:   84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            + N+++ + F+  + ++   +C  + FYT DAF+ AA+++P F + G     KREIAAF A  +HET                +CY  E+N  + YC   +  YPC PGK Y+GRGP+QL+ N NYG  G+AIG D L  P+ ++ DP +SFK+A WFWMT      + H V+                 G+G     ING +ECG    AQV+ RIG+YK YC+  GV+ G NL
Sbjct:   74 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNL 307          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.161e-39
Identity = 98/244 (40.16%), Postives = 124/244 (50.82%), Query Frame = 3
Query:   51 LTFPTNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET------------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            L F T    Q+V  IVT   F+  +KN+    C  K FYT DAF+ AA ++P FG+ G     K+EIAAFF   +HET            G +C++ E N+                G  +YGRGPIQLTG  NY  AG+AIG D +  P+ VA D  VSFKTA+WFWMT      + H V+                 G+G     ING +ECG  Q  QV+ RIG+Y+ YC    VAPG NL
Sbjct:    8 LLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQM---------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNL 236          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.823e-39
Identity = 94/234 (40.17%), Postives = 127/234 (54.27%), Query Frame = 3
Query:   84 VANIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            V  +V+ + F+ +  ++  A+C  + FYT DA + AA A+P F + G  E  KRE+AAF    +HET               +C+ EEI  +  YC   + ++PC P K Y+GRGPIQL+ N NYG AG+AIG D L  PE VA DPVVSFKTA+WFWMT      + H V+                 G+G     ING +ECG     +V  RIG+Y+ YC+  G+  G NL
Sbjct:   86 VEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYC-VPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNL 318          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.288e-39
Identity = 102/252 (40.48%), Postives = 129/252 (51.19%), Query Frame = 3
Query:   42 ILALTFP-----TNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET------------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +LAL+F      T  + QNV +IVT   FD  +KN+  A C    FYT DAF+ AA ++P FG+ G     K+EIAAFF   +HET            G +C++ E N+                G  YYGRGPIQLTG  NY  AGKAI  D +  P+ VA D  VSFKTA+WFWMT      + H V+                 G+G     ING +ECG  Q A+V+ RIGYY+   +   VAPG NL
Sbjct:    7 VLALSFVVFLFLTGTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQM---------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNL 243          
The following BLAST results are available for this feature:
BLAST of FC871134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHID_SOLLC5.688e-4039.08Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI1_ORYSJ5.688e-4042.37Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI2_ORYSJ7.428e-4039.74Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI2_GOSHI9.702e-4038.72Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_THECC9.702e-4040.34Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI3_SOLTU1.267e-3938.98Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_GOSHI1.267e-3938.72Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIB_SOLLC2.161e-3940.16Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI9_ORYSJ2.823e-3940.17Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIT_PETHY6.288e-3940.48Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AB06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871134 ID=FC871134; Name=FC871134; organism=Citrus sinensis; type=EST; length=749bp
CTTAAGATGATATAAATATAGTACCCATTGCTCTTGAGGGCATTCTTGCC
CTAACTTTTCCCACCAATGTAATGTGTCAAAATGTTGCTAACATTGTGAC
TCCCCAGTTCTTCGACGGCATAAAGAATCAGGCAGCCGCGAGTTGTGCCG
GCAAGAGCTTCTACACGAGAGATGCGTTTCTGAATGCTGCCAAGGCTTAT
CCTCAATTTGGTAGCGGCTCTCCAGAAGTTTCGAAGCGTGAGATTGCTGC
ATTTTTTGCACACGTCACTCATGAAACTGGACATTTCTGCTACATAGAAG
AGATTAACAAGTCCAACAGGTACTGTGATGAACAAAACAAACAGTACCCA
TGTGTTCCCGGAAAGTTCTACTACGGCCGTGGACCGATCCAACTCACCGG
AAATGGCAACTACGGAGCTGCCGGAAAAGCCATCGGGTTTGACGGATTAA
GAGCTCCCGAAACGGTGGCCAAGGACCCCGTTGTGTCATTTAAGACTGCC
GTGTGGTTTTGGATGACCAATGTGCACCCAGTTGTGAACCAAGGTTTTGG
TGCAACAATTCAGAGAATCAATGGTGCCGTTGAATGCGGTGGCAAGCAAC
CTGCTCAGGTTCAAGCTCGCATTGGATATTATAAGGATTATTGCAACAAA
TTTGGTGTTGCTCCTGGCCCAAATCTCTTCTTGTTAAAATGTTTTCGCCG
ATACTTCACTGGTTTGTTGAAATAAGGTGGGGTAATTTTTATAATATAG
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