FC871134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40 Identity = 93/238 (39.08%), Postives = 126/238 (52.94%), Query Frame = 3 Query: 72 MCQNVANIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 + QN++++++ F+ I ++ +C K FYT +AF+ A K + FG+ G +EIAAF A +HET +CY E YC ++Q+PC PGK Y+GRGPIQ++ N NYGAAG AIG + L P+ VA D VVSFKTA+WFWMT + H V+ GFG ING +EC A + RIG+Y+ YC GV PG NL Sbjct: 1 LSQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYC-ASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNL 237
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.688e-40 Identity = 100/236 (42.37%), Postives = 131/236 (55.51%), Query Frame = 3 Query: 84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKS--NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 VA+IV+ FD + ++ A+C K+FYT DAF+ AA A+P F + G KRE+AAF A +HET +C+ EE N + + YC Q+ Q+PC GK YYGRGPIQ++ N NYG AG+AIG + L P+ VA D VSFKTA WFWMT + H V+ G+G ING VECG ++V RIG+YK YC+ GV+ G NL Sbjct: 79 VASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYC-VQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANL 313
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.428e-40 Identity = 93/234 (39.74%), Postives = 128/234 (54.70%), Query Frame = 3 Query: 84 VANIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 V +IV F+ + ++ +C + FYT +AFL AA A+P FG +G+ E KRE+AAF +HET +C+ +E N + YC + + ++PC PG+ YYGRGPIQL+ N NYG AG+AIG D L P+ VA D VSFKTA+WFWMT + H V+ G+G +NG +ECG +V RIG+Y+ YC FG+ G NL Sbjct: 89 VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYC-QPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNL 321
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 9.702e-40 Identity = 91/235 (38.72%), Postives = 129/235 (54.89%), Query Frame = 3 Query: 84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 + N+++ + F+ + ++ +C + FYT DAF+ AA+++P F + G KREIAAF A +HET +CY E+N + YC + YPC PGK Y+GRGP+QL+ N NYG G+AIG D L P+ ++ DP +SFK+A WFWMT + H V+ G+G ING +ECG AQV+ RIG+YK YC+ GV+ G NL Sbjct: 52 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNL 285
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.702e-40 Identity = 94/233 (40.34%), Postives = 128/233 (54.94%), Query Frame = 3 Query: 90 NIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 +++T + FD + ++ C + FYT DAF+ AAK++P F + G KRE+AAF A +HET +CY E+N ++ YC + + YPC PGK Y+GRGP+QLT N NYG G+AIG D L P+ +A DP +SFK+A WFWMT + H V+ GFG ING +ECG A+V+ RIG+YK YC+ GV G NL Sbjct: 74 SLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YC-QWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNL 304
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.267e-39 Identity = 92/236 (38.98%), Postives = 130/236 (55.08%), Query Frame = 3 Query: 81 NVANIVTPQFFDGIKNQAAAS-CAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 ++ +++ FD + N + C GK+ FY+ +AF++AA ++P FG+ G KREIAAF A +HET +C++ E YC + Q+PC PG+ Y+GRGPIQ++ N NYG G+AIG D L P+ VA D V+SFK+A+WFWMT + H V+ GFG ING +ECG ++VQ RIG+Y+ YC GV+PG NL Sbjct: 67 DLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSS-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNL 301
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.267e-39 Identity = 91/235 (38.72%), Postives = 129/235 (54.89%), Query Frame = 3 Query: 84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH--------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 + N+++ + F+ + ++ +C + FYT DAF+ AA+++P F + G KREIAAF A +HET +CY E+N + YC + YPC PGK Y+GRGP+QL+ N NYG G+AIG D L P+ ++ DP +SFK+A WFWMT + H V+ G+G ING +ECG AQV+ RIG+YK YC+ GV+ G NL Sbjct: 74 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC-ASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNL 307
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.161e-39 Identity = 98/244 (40.16%), Postives = 124/244 (50.82%), Query Frame = 3 Query: 51 LTFPTNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET------------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 L F T Q+V IVT F+ +KN+ C K FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G +C++ E N+ G +YGRGPIQLTG NY AG+AIG D + P+ VA D VSFKTA+WFWMT + H V+ G+G ING +ECG Q QV+ RIG+Y+ YC VAPG NL Sbjct: 8 LLFLTGSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGPFAGGYCFVREGNQM---------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNL 236
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.823e-39 Identity = 94/234 (40.17%), Postives = 127/234 (54.27%), Query Frame = 3 Query: 84 VANIVTPQFFDGIK-NQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 V +V+ + F+ + ++ A+C + FYT DA + AA A+P F + G E KRE+AAF +HET +C+ EEI + YC + ++PC P K Y+GRGPIQL+ N NYG AG+AIG D L PE VA DPVVSFKTA+WFWMT + H V+ G+G ING +ECG +V RIG+Y+ YC+ G+ G NL Sbjct: 86 VEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYC-VPSAEWPCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNL 318
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.288e-39 Identity = 102/252 (40.48%), Postives = 129/252 (51.19%), Query Frame = 3 Query: 42 ILALTFP-----TNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET------------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 +LAL+F T + QNV +IVT FD +KN+ A C FYT DAF+ AA ++P FG+ G K+EIAAFF +HET G +C++ E N+ G YYGRGPIQLTG NY AGKAI D + P+ VA D VSFKTA+WFWMT + H V+ G+G ING +ECG Q A+V+ RIGYY+ + VAPG NL Sbjct: 7 VLALSFVVFLFLTGTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTLSPDGPYAGGYCFLREGNQM---------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAPGDNL 243 The following BLAST results are available for this feature:
BLAST of FC871134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871134 ID=FC871134; Name=FC871134; organism=Citrus sinensis; type=EST; length=749bpback to top |