FC871134

Overview
NameFC871134
Unique NameFC871134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1125 contig Csv1_Contig1125:30..776. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.121e-38
Identity = 88/225 (39.11%), Postives = 127/225 (56.44%), Query Frame = 3
Query:   81 NVANIVTPQFFDG-IKNQAAASCAGKS-FYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 644
            ++ ++++   FD  +K++   +C GK+ FY+ +AF+NAA+++  FG+ G     KREIAAFFA  +HET               +C++ E      YC     Q+PC PG+ Y+GRGPIQ++ N NYG  G+AIG D L  P+ VA DPV+SFK+A+WFWMT      + H V+                 GFG     ING +ECG    ++VQ RIG+Y+ YC
Sbjct:   77 DIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSG-QWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLECGRGSDSRVQDRIGFYRRYC 300          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.023e-37
Identity = 99/247 (40.08%), Postives = 131/247 (53.04%), Query Frame = 3
Query:   54 TFPTNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS--GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNR--YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            T P+      VA+IV+   FD  + ++  A+C   +FYT DAF+ AA A+P F +  G  + +KRE+AAF A  +HET               +C+ EE   +    YC +Q+ Q+PC  GK YYGRGPIQL+ N NYG AG+AIG D L  P+ VA D  VSF TA WFWMT      + H V                  G+G     ING +ECG  +  +V  RIG+YK YC+  GV+   NL
Sbjct:   71 TPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYC-QQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLECGHGEDDRVADRIGFYKRYCDILGVSYDANL 316          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.886e-37
Identity = 93/252 (36.90%), Postives = 128/252 (50.79%), Query Frame = 3
Query:   24 PIALEGILALTFPTNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKR-EIAAFFAHVTHET-----------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            P+AL   +   F T  + Q + +IVT   F+  +KN+    C    FYT DAF+ AA ++P FG+   + ++R EIAAFF   +HET           G +C++ + ++S+RY                YGRGPIQLT   NY  AG AIG + +  P+ VA D  +SFKTA+WFWMT      + H V+                 G+G     ING +ECG  +   V+ RIGYY+ YC    VAPG NL
Sbjct:    7 PMALFCCVFFLFLTGSLAQGIGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENL 242          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.687e-37
Identity = 97/259 (37.45%), Postives = 132/259 (50.97%), Query Frame = 3
Query:   12 INIVPIALEGILALTFPTNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS--GSPEVSKREIAAFFAHVTHETGH------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECG-GKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            + +   A   +LA+   +    Q V +++T   F+  + N+  + C  + FYT DAF+ AA ++P FG+  GS E+ +RE+AAFF   +HET              +C+ EEINK+                  YYGRGPIQLTG  NY AAG A+G D +  P+ V+ D VVSFKTA+WFWMT      + H V+                 G+G     ING +ECG G+  A V  RIGYYK YC+  G   G NL
Sbjct:    9 VQLAACAAASLLAVA-ASGAAAQGVGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGSSDQFQWGYCFKEEINKAT--------------SPPYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVD-RIGYYKRYCDMLGAGYGSNL 251          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.311e-36
Identity = 94/252 (37.30%), Postives = 124/252 (49.21%), Query Frame = 3
Query:   24 PIALEGILALTFPTNVMCQNVANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHET-----------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            P+ L   +   F T  + Q + +IVT   F+  +KN+    C    FYT DAF+ AA ++P FG SG     ++EIAAFF   +HET           G +C++ + ++S+RY                YGRGPIQLT   NY  AG AI  D +  P+ VA D  +SFKTA+WFWMT      + H V+                 G G     ING +ECG    A V+ RIGYY+ YC    VAPG NL
Sbjct:    7 PLTLFCCVFFLFLTGSLAQGIGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAEPFTGGYCFVRQNDQSDRY----------------YGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAPGDNL 242          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.983e-36
Identity = 93/235 (39.57%), Postives = 122/235 (51.91%), Query Frame = 3
Query:   84 VANIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWM------TNVHPVVN---------------QGFGATIQRINGAVECG-GKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            +++I+    FD + K +  A C    FYT +AF++AAK +P FG+ G   + KREIAAF    +HET               +CY++EIN    YCD  +  Y CV GK Y GRGPIQL+ N NYG  G  +    L+ PE V  DPV+SFKTA+WFWM       + H V+                 G+G     ING +ECG G   A  + RIG+YK YC+  G   G NL
Sbjct:   89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSN-YQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNL 321          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.499e-36
Identity = 97/258 (37.60%), Postives = 132/258 (51.16%), Query Frame = 3
Query:   15 NIV-PIALEGILALTFPTNVMCQNVANIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            NIV P+AL  +  L F T  + QN  +IVT + F+     +N  A  C  K FYT DAF+ AA ++P FG+ G     K+EIAAFF   +HET         G +C++ +I++S+RY                YGRGPIQLT   NY  AG+ IG   D +  P+ VA DP++SF+TA+WFWMT      + H V+                 G+G     ING +EC       V++RIG+Y+ YC    V  G NL
Sbjct:    4 NIVSPVALSCLFFL-FLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGGSAGTFTGGYCFVRQIDQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENL 242          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.450e-35
Identity = 97/258 (37.60%), Postives = 131/258 (50.78%), Query Frame = 3
Query:   15 NIV-PIALEGILALTFPTNVMCQNVANIVTPQFFD---GIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET---------GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGF--DGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            NIV P+AL  +  L F T  + QN  +IVT + F+     +N  A  C  K FYT DAF+ AA ++P FG+ G     K+EIAAFF   +HET         G +C++++I +S+RY                YGRGPIQLT   NY  AG+ IG   + +  P+ VA DP++SFKTA+WFWMT      + H V+                 G+G     ING  ECG       ++RIG+Y+ YC    V  G NL
Sbjct:    4 NIVSPVALSCLFFL-FLTGTLAQNAGSIVTRELFEQMLSFRNNDA--CPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGGSAGTFTGGYCFVKQIEQSDRY----------------YGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENL 242          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35
Identity = 88/228 (38.60%), Postives = 122/228 (53.51%), Query Frame = 3
Query:   84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT-------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            VA++VT   F+  + ++  A+C  + FY   AF+ AA A+P F + G  +  KRE+AAF A  +H T        +CY E    ++ +C   N ++PC PGK Y+ RGP+Q+  N NYGAAG+AIG D L  PE VA DP V+FKTA+W WMT       + H VV                 G+G T   + G ++C G        R+ +YK YC+  GV  GPNL
Sbjct:   97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNL 321          
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 4.218e-35
Identity = 88/228 (38.60%), Postives = 122/228 (53.51%), Query Frame = 3
Query:   84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT-------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677
            VA++VT   F+  + ++  A+C  + FY   AF+ AA A+P F + G  +  KRE+AAF A  +H T        +CY E    ++ +C   N ++PC PGK Y+ RGP+Q+  N NYGAAG+AIG D L  PE VA DP V+FKTA+W WMT       + H VV                 G+G T   + G ++C G        R+ +YK YC+  GV  GPNL
Sbjct:   97 VASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGGPYSWGYCYKEVKGATSDFC-VPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGG--ADRVAFYKRYCDVLGVGYGPNL 321          
The following BLAST results are available for this feature:
BLAST of FC871134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI4_SOLTU3.121e-3839.11Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHI12_ORYSJ2.023e-3740.08Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIQ_TOBAC5.886e-3736.90Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHI8_ORYSJ7.687e-3737.45Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIP_TOBAC1.311e-3637.30Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHI6_POPTR4.983e-3639.57Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHIA_SOLCI8.499e-3637.60Acidic endochitinase pcht28 OS=Solanum chilense PE... [more]
CHIA_SOLLC1.450e-3537.60Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI7_ORYSJ4.218e-3538.60Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI4.218e-3538.60Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AB06FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871134 ID=FC871134; Name=FC871134; organism=Citrus sinensis; type=EST; length=749bp
CTTAAGATGATATAAATATAGTACCCATTGCTCTTGAGGGCATTCTTGCC
CTAACTTTTCCCACCAATGTAATGTGTCAAAATGTTGCTAACATTGTGAC
TCCCCAGTTCTTCGACGGCATAAAGAATCAGGCAGCCGCGAGTTGTGCCG
GCAAGAGCTTCTACACGAGAGATGCGTTTCTGAATGCTGCCAAGGCTTAT
CCTCAATTTGGTAGCGGCTCTCCAGAAGTTTCGAAGCGTGAGATTGCTGC
ATTTTTTGCACACGTCACTCATGAAACTGGACATTTCTGCTACATAGAAG
AGATTAACAAGTCCAACAGGTACTGTGATGAACAAAACAAACAGTACCCA
TGTGTTCCCGGAAAGTTCTACTACGGCCGTGGACCGATCCAACTCACCGG
AAATGGCAACTACGGAGCTGCCGGAAAAGCCATCGGGTTTGACGGATTAA
GAGCTCCCGAAACGGTGGCCAAGGACCCCGTTGTGTCATTTAAGACTGCC
GTGTGGTTTTGGATGACCAATGTGCACCCAGTTGTGAACCAAGGTTTTGG
TGCAACAATTCAGAGAATCAATGGTGCCGTTGAATGCGGTGGCAAGCAAC
CTGCTCAGGTTCAAGCTCGCATTGGATATTATAAGGATTATTGCAACAAA
TTTGGTGTTGCTCCTGGCCCAAATCTCTTCTTGTTAAAATGTTTTCGCCG
ATACTTCACTGGTTTGTTGAAATAAGGTGGGGTAATTTTTATAATATAG
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