FC871134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.357e-33 Identity = 86/224 (38.39%), Postives = 111/224 (49.55%), Query Frame = 3 Query: 120 IKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQ-YPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT-------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLF 680 + N+ SC GK FYT DA+ A + YP FG +G + KRE+AAFFA + ET +C + E+N ++ YCD + K YPCV YYGRGP+QL N NYG G +G + L PE VA DPV+SF+ A+WFWM + H V+ GFG I EC + Q RI YY YC+ V PG NL+ Sbjct: 76 LPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVAD--YYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDMLQVDPGDNLY 297
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.559e-32 Identity = 88/223 (39.46%), Postives = 120/223 (53.81%), Query Frame = 3 Query: 84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHET-GHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHP-------VVNQ--------------GFGATIQRINGAVECG-GKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 V +I+T F+ + ++ C G +FYT DAF+ AA +P+FG+ G+ E +RE+AAFF +HET G + + + YC N+ P P YYGRGPIQLT NY AG A+G D + P+ V+ DPVV+F+TA+WFWMT P + NQ G+G ING ECG G + R+GYYK YC+ F V G N+ Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYC-RVNEITPSDPP--YYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNI 245
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.128e-30 Identity = 79/193 (40.93%), Postives = 102/193 (52.85%), Query Frame = 3 Query: 153 KSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVN---------------QGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAP 665 + FYT DAF+ AAK++P F + GS +V KRE+AAF A +HET + + + Y Y+GRGPIQ++ N NYGAAGKAIG D LR P+ V D V FKTA+WFWMT + H V+ G+G I+G VECG Q + V RIGYYKD + + P Sbjct: 17 RGFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHET-----------TGGWPTAPDGPYELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYKDNLDCYNQKP 198
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.716e-28 Identity = 83/232 (35.78%), Postives = 119/232 (51.29%), Query Frame = 3 Query: 66 NVMCQNVANIV-TPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH------------FCYIEEINKS-NRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVNQGFGATIQRINGAV-------ECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 N ++ N+V T FD + + C + FY+ +FL AA+++P FG+ G KRE+AAF AH++ T C+I + N +C + +PC GK Y RGPIQLT N NYG AG+AIG D ++ P+ V KDP++SFKTA+WFWM+ + H +V A + N V G A + IG+YK YC+ GV+ G +L Sbjct: 123 NSTANSIGNVVVTEPLFDQMFSHRK-DCPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVENPHAWGLCHINTTTVTENDFCTSSD--WPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLNANSAANRIPNKGVIGNIISRAFGHDDFAVRSSSIGFYKRYCDMLGVSYGHDL 351
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: IAMY_COILA (Alpha-amylase inhibitor/endochitinase (Fragments) OS=Coix lachryma-jobi PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.714e-24 Identity = 61/141 (43.26%), Postives = 74/141 (52.48%), Query Frame = 3 Query: 255 FAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNL 677 FAHVTHETG+ N YCD Q PC GK YYGRGPIQ++ N NYG AG+AIG DGL P+ VA+D + +KTA+ F +NG G A + YY+ YC + GV PGPNL Sbjct: 24 FAHVTHETGN----------NAYCDPSKTQKPCAAGKKYYGRGPIQISXNYNYGPAGRAIGMDGLGNPDRVAQDALDDYKTALXF------------------LVNGEEAVPGLSAANA---VSYYRQYCQQLGVDPGPNL 133
BLAST of FC871134 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.663e-23 Identity = 74/222 (33.33%), Postives = 102/222 (45.95%), Query Frame = 3 Query: 84 VANIVTPQFFDG-IKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVVNQ---------------GFGATIQRINGAVECGGKQPAQV-QARIGYYKDYCNKFGVAPGPNL 677 +++I+ FD +K + C FYT +AF++AAK +P FG+ G + KREIAAF +HET N +P G Y G + N NYG G + L+ PE V DP ++FKTA+WFWMT + H V+ + G+G ING +ECG P + RIG+YK YC+ G G NL Sbjct: 85 LSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHET-------------------NGWWPAAQGD-QYDWGYCHM--NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNL 284 The following BLAST results are available for this feature:
BLAST of FC871134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871134 ID=FC871134; Name=FC871134; organism=Citrus sinensis; type=EST; length=749bpback to top |