FC871123

Overview
NameFC871123
Unique NameFC871123
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12709 contig Csv1_Contig12709:705..1481. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.168e-43
Identity = 108/253 (42.69%), Postives = 137/253 (54.15%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKR-----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLP--PLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEEVYE 739
            L +YR EEL  LRG G+GE K +DR+YDY  YNDLG P K P   RPVLGG Q  PYPRR RTGR     D  +E R       + YVPRDE F  +K   F A  + ++   + P+LE  F D    F  F  +  ++ EG++LP   L      N  L  L +     G   L F  P+ +  DK  W  DEEF+R+ LAGLNP  I+L+ E+P KS LD + YG   S IT   IE  + G ++VEE  E
Sbjct:  174 LLKYREEELVSLRGTGEGELKEWDRVYDYAYYNDLGVPPKNP---RPVLGGTQEYPYPRRGRTGRKPTKEDPQTESRLPITSSLDIYVPRDERFGHLKMSDFLAYALKAIAQFIQPALEAVFDDTPKEFDSFEDVLKIYEEGIDLPNQALIDSIVKNIPLEMLKEIFRTDGQKFLKFPVPQVIKEDKTAWRTDEEFAREMLAGLNPVVIQLLKEFPPKSKLDSESYGNQNSTITKSHIEHNLDG-LTVEEALE 422          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.526e-43
Identity = 103/255 (40.39%), Postives = 141/255 (55.29%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREG-----NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFW-----NTLLPRLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEEV 733
            L++YR  EL  LRG+G G+ + +DR+YDY  YNDLG+PDK  E ARP+LGG    PYPRR RTGR     D   E R       + YVPRDE F  VK+  F   ++ S L  L+P+ +    +    F  F+ +  L+  G+ LP    EG W     + +   ++K I  T G  +L + TP+ +  DK  W  DEEF R+ LAG NP  I  + E+P KS LDP IYG   S ITTE ++ ++ G+   E +
Sbjct:  171 LRKYRENELVALRGDGTGKLEEWDRVYDYACYNDLGEPDKGEEYARPILGGSSEYPYPRRGRTGREPTKADPNCESRNPLPMSLDIYVPRDERFGHVKKSDFLTSSLKSSLQTLLPAFKALCDNTPNEFNSFADVLNLYEGGIKLP----EGPWLKAITDNISSEILKDILQTDGQGLLKYPTPQVIQGDKTAWRTDEEFGREMLAGSNPVLISRLQEFPPKSKLDPTIYGNQNSTITTEHVQDKLNGLTVNEAI 421          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.993e-43
Identity = 107/238 (44.96%), Postives = 136/238 (57.14%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-----FPYFSAIDALFNEGVNLPPLKQEGFWNTL--LPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELI 694
            L +YR EEL  LRG+G GERK ++RIYDYDVYNDLG+PD    LARP+LGG   +PYPRR RTGR     D  SEK     YVPRDE F  +K   F A  + SV   +VP+ E+AF   DL      F  F  +  LF  G+ LP        +TL  LP + +     G+ +L F  P  +   K  W  DEEF+R+ LAG+NP  IR + E+P KS LDP  YG   S I+ +++
Sbjct:  184 LVKYREEELQTLRGDGTGERKLHERIYDYDVYNDLGNPDHGEHLARPILGGSSTHPYPRRGRTGRYPTRKDPNSEKPATETYVPRDENFGHLKSSDFLAYGIKSVSQCVVPAFESAF---DLNFTPNEFDSFQDVRNLFEGGIKLP----LDVISTLSPLPVVKEIFRTDGEQVLKFTPPHVIRVSKSAWMTDEEFAREMLAGVNPCMIRGLQEFPPKSNLDPAEYGDHTSKISVDVL 414          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX2_SOYBN (Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.889e-43
Identity = 106/236 (44.92%), Postives = 138/236 (58.47%), Query Frame = 2
Query:   14 YRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-----FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIE 697
            YR EEL  LRG+G+GERK +DRIYDYDVYNDLG+PD     ARP+LGG   +PYPRR RTGR     DQ SEK  G  YVPRDE F  +K   F A  + S+   ++P+ E+ F   DL      F  F  +  L   G+ LP        +T++P  +VK +  T G+ +L F  P  +   K  W  DEEF+R+ +AG+NP  IR + E+P KS LDP IYG   S IT + ++
Sbjct:  191 YREEELKNLRGDGKGERKEHDRIYDYDVYNDLGNPDHGENFARPILGGSSTHPYPRRGRTGRYPTRKDQNSEK-PGEVYVPRDENFGHLKSSDFLAYGIKSLSQYVLPAFESVF---DLNFTPNEFDSFQDVRDLHEGGIKLP----TEVISTIMPLPVVKELFRTDGEQVLKFPPPHVIQVSKSAWMTDEEFAREMVAGVNPCVIRGLQEFPPKSNLDPTIYGEQTSKITADALD 418          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.908e-42
Identity = 101/242 (41.74%), Postives = 136/242 (56.20%), Query Frame = 2
Query:   14 YRAEELTILRGNGQ-GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKR----EGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVKAIEDT-GDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGM 715
            YR EEL ILRG+G+ G  K +DRIY YD YNDLG PDK  +L RPVLGG Q  PYPRR RTGR    TD  +E R    + N YVPRDE F  +K   F   ++ +++  ++P + T        F  F  I  L+  G+ +            +P  L+K++    GD +L    P  +  DKF W  DEEF+R+ LAG+NP  I+ +T +P KSTLDP++YG   S IT   I+  + G+
Sbjct:  181 YRQEELNILRGDGKIGPYKEHDRIYRYDYYNDLGQPDKGSKLVRPVLGGSQELPYPRRGRTGRAPTKTDPNTESRLPLLDLNIYVPRDERFGHLKMSDFLGYSLKAIVEGVLPIIRTYVDTTPKEFDSFQDIMELYEGGLKVANASALAEIKKRVPFELIKSLLPVAGDQVLKLPLPHVIKEDKFAWRTDEEFAREMLAGVNPVMIKRLTNFPAKSTLDPNVYGDHTSKITEAHIKHNMEGL 422          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.093e-41
Identity = 102/243 (41.98%), Postives = 136/243 (55.97%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREGNFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLPRLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEE 730
            L +YR EEL  LRG+G GERK YDRIYDY VYNDLG+PDK   LAR  LGG  + PYPRR RTGR     D   E    + Y+PRDE F  +K   F    + S+   ++P+ + AF   +  F  F  +  LF  G+ LP         + +P L + +   G+ +L F  P  +   K  W  DEEF R+ LAG+NP  I+ + E+P KS LD  +YG   S +T E +E  +GG ++VEE
Sbjct:  184 LVKYRKEELENLRGDGTGERKEYDRIYDYAVYNDLGNPDKNKNLARTTLGGSSDFPYPRRGRTGRKSTRKDPKCEIPTSDTYIPRDENFGHLKSGDFLTYAIKSLTQNVLPTFQKAF-GFNNEFDTFEDVRGLFEGGLYLPTDVISKI--SPIPVLKEILRTDGEQVLKFPPPHVIRVTKSAWMTDEEFGREMLAGVNPCLIQRLQEFPPKSKLDVTVYGDQTSTMTKEHLEINLGG-LTVEE 422          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.999e-40
Identity = 106/253 (41.90%), Postives = 148/253 (58.50%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNG-QGERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQ-NPYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLPPLKQ-EGFWNTLLPRLVKAIEDTGDNILL-FETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEEVYE 739
            L+ YR +EL  LRG   QG  + +DRIY YDVYNDLG+PD+  +  RPVLGG Q +PYPRR RTGR     D  SE R       YVP DE F+ +K   F+  ++ +++  ++P++ T +VD   G F  F  I  L+  G+ LP +   E    +   +L+K +   G + LL F  P+ +  ++  W  DEEF+R+ LAGLNP  IR +TE+P KSTLDP  YG   S IT   IEK + G +SV++  +
Sbjct:  171 LRPYREDELRYLRGEDRQGPYQEHDRIYRYDVYNDLGEPDR--DNPRPVLGGSQKHPYPRRGRTGRIPTKKDPNSESRLSLLEQIYVPSDERFAHLKMSDFAGYSIKAIVQGILPAIRT-YVDLTPGEFDSFEDILKLYRGGLKLPSIPALEELRKSFPVQLIKDLLPVGGSYLLKFPKPDIIKENEVAWRTDEEFAREILAGLNPMVIRRLTEFPPKSTLDPSKYGDQTSTITPAHIEKNLEG-LSVQQALD 419          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX5_ARATH (Lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.615e-38
Identity = 101/253 (39.92%), Postives = 134/253 (52.96%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQG-ERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREG----NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLGFPYFSAIDALFNEGVNLPPLKQEGFWNTLLP--RLVKAIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGMISVEEVYE 739
            +K  R EEL  LRGN +G E K +DR+YDY  YNDLG PDK P+  RPVLGG    PYPRR +TGR    +D  SE R      N YVPRDE FS VK   F A  + SV   LVP + +        F  F  +  L++  + L           ++P     + + + G+  L +  P+ +   +  W  DEEF+R+ LAGLNP  I  + E+P KS LD   YG   S+I TE IE  + G ++V+E  E
Sbjct:  193 IKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLGAPDKGPDSVRPVLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNLNIYVPRDERFSHVKFSDFLAYALKSVTQVLVPEIASVCDKTINEFDSFEDVFHLYDGSIKLANGHTISKLRDVIPWEMFRELVRNDGERFLKYPLPDILKESRSAWRTDEEFAREMLAGLNPVVISRLQEFPPKSCLDSAKYGNQHSSIRTEHIESNMNG-LNVQEALE 444          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.634e-37
Identity = 102/245 (41.63%), Postives = 137/245 (55.92%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQ-GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVK-AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGM 715
            LK YR +EL  LRG+ Q G  + +DR+Y YDVYNDLG+PD      RPVLGG  + PYPRR RTGR    TD  +E R     N YVPRDE F  +K   F   ++ +++  +VP++ T +VD   G F  F  I  L+  G+ LP +          P +LVK  I   GD +L    P  +  DK  W  D+EF+R+ LAG+NP  I  +TE+P +S LDP  YG   S IT   +E+ + G+
Sbjct:  171 LKPYRDDELRNLRGDDQQGPYQEHDRVYRYDVYNDLGEPDSGNP--RPVLGGSPDRPYPRRGRTGRKPTKTDPTAESRLSLLENIYVPRDERFGHLKMADFLGYSIKALVDGIVPAIRT-YVDLTPGEFDSFKDILKLYEGGLKLPSIPALEELRKRFPLQLVKDLIPAGGDYLLKLPMPHVIREDKKAWMTDDEFAREILAGVNPMVIARLTEFPPRSRLDPARYGDQTSTITAAHVERGLEGL 412          
BLAST of FC871123 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.754e-37
Identity = 102/245 (41.63%), Postives = 135/245 (55.10%), Query Frame = 2
Query:    5 LKRYRAEELTILRGNGQ-GERKTYDRIYDYDVYNDLGDPDKKPELARPVLGGKQN-PYPRRCRTGRPRCDTDQFSEKREG---NFYVPRDEAFSEVKQLTFSAKTVYSVLHALVPSLETAFVDPDLG-FPYFSAIDALFNEGVNLPPLKQEGFWNTLLP-RLVK-AIEDTGDNILLFETPETMDRDKFFWFRDEEFSRQTLAGLNPYSIRLITEWPLKSTLDPDIYGPPESAITTELIEKEIGGM 715
            LK YR +EL  LRG+ Q G  + +DR+Y YDVYNDLG PD      RP+LGG  + PYPRR RTGR    TD  SE R       YVPRDE F  +K   F   ++ ++   +VP++ T +VD   G F  F  I  L+  G+ LP +          P +LVK  +   GD IL    P+ + +DK  W  DEEF+R+ LAG+NP  I  +TE+P KS+LDP  +G   S IT   I   + G+
Sbjct:  174 LKPYRDDELRNLRGDDQQGPYEEHDRVYRYDVYNDLGSPDSGNP--RPILGGSPDTPYPRRGRTGRKPTTTDPDSESRLSLVEQIYVPRDERFGHLKMADFLGYSIKAIAEGIVPAIRT-YVDTTPGEFDSFQDILDLYEGGLKLPDVPALEELRKRFPLQLVKDLLPAAGDYILKLPMPQIIKQDKEAWRTDEEFAREVLAGVNPMMITRLTEFPPKSSLDPSKFGDHTSMITAAHIGSNLEGL 415          
The following BLAST results are available for this feature:
BLAST of FC871123 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX1_ARATH1.168e-4342.69Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOXB_SOLLC1.526e-4340.39Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]
LOX2_PEA1.993e-4344.96Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOX2_SOYBN9.889e-4344.92Seed lipoxygenase-2 OS=Glycine max GN=LOX1.2 PE=2 ... [more]
LOX4_ORYSJ4.908e-4241.74Probable lipoxygenase 4 OS=Oryza sativa subsp. jap... [more]
LOXA_PHAVU1.093e-4141.98Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]
LOX1_ORYSJ5.999e-4041.90Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=... [more]
LOX5_ARATH5.615e-3839.92Lipoxygenase 5, chloroplastic OS=Arabidopsis thali... [more]
LOX2_ORYSJ1.634e-3741.63Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOX3_ORYSJ4.754e-3741.63Putative lipoxygenase 3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK2AA03FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK2AA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871123 ID=FC871123; Name=FC871123; organism=Citrus sinensis; type=EST; length=777bp
CGGATTGAAGAGATATAGAGCTGAGGAGCTTACCATTTTGCGAGGTAATG
GACAAGGAGAGCGCAAAACCTATGATAGAATCTATGATTATGATGTCTAC
AATGATCTTGGAGATCCAGACAAGAAACCTGAATTAGCAAGGCCTGTGCT
TGGAGGCAAACAAAACCCTTATCCTAGACGTTGCAGAACTGGACGCCCAC
GGTGTGACACAGATCAATTTTCGGAGAAAAGAGAGGGAAACTTTTATGTT
CCAAGGGATGAAGCATTCTCGGAGGTAAAGCAGCTAACATTTTCAGCAAA
GACGGTGTACTCAGTGTTGCATGCGTTGGTACCATCCTTAGAAACCGCCT
TTGTCGATCCTGATCTGGGGTTTCCATACTTCTCTGCTATTGACGCACTC
TTCAATGAAGGAGTCAACTTGCCTCCACTCAAACAGGAAGGTTTTTGGAA
CACACTGCTTCCCAGATTGGTTAAGGCAATTGAGGATACAGGAGATAATA
TTTTGCTGTTTGAGACGCCAGAAACAATGGACAGAGACAAATTCTTTTGG
TTTAGGGATGAGGAATTTTCTAGGCAAACTCTCGCTGGTCTCAACCCGTA
TAGCATAAGGTTGATCACGGAATGGCCGTTGAAAAGCACACTCGATCCTG
ATATTTACGGACCACCAGAATCAGCAATTACCACAGAATTGATTGAAAAA
GAAATTGGAGGAATGATTTCTGTTGAAGAGGTATACGAATGATCATTCTG
AAATATAAATCAACAAGAAAAAGTGAC
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