FC871119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.345e-28 Identity = 92/262 (35.11%), Postives = 127/262 (48.47%), Query Frame = 3 Query: 12 VMHLAAQAGVRYAMQNP-HSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYG-----LNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGN--GDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 773 + HLAA GVR + N H Y NI L LLEAC+ + Q + V+AS+SSVYG ++EN S P S Y TK GE++ H Y +G+ I LRFFTVYGP RPDMA+ + LQ KP+T++ +RDFTYI D VKG L N+G +V K+V+++E + +K + G+ T A+IS A++ Y P T L+ GL + + S Y Sbjct: 78 IFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQ-TFVFASTSSVYGEKQGKVSENTSLS-------PLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIFGDGQQ---SRDFTYISDCVKGITAVLGKPHLIG------------ETVNIGGAERASVLKVVSLIE---DISGRKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGLTNEIAYLSSLY 313
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.796e-18 Identity = 67/253 (26.48%), Postives = 112/253 (44.27%), Query Frame = 3 Query: 12 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYG----PWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRW 758 V+H AAQ VR +++NP N+ G + +LE + + + +S +VYG +P E + P S Y +K GEE YN +YG+ LR+ VYG P G + + + PI G RDF Y+ D+ K L +L+ I N+G +V +L +I++ + + + + + P G+V + +I A+ G++P DL+ G+K+ V W Sbjct: 68 VIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDE-NHPINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQ----TRDFVYVGDVAKANLMALNWKN---------------EIVNIGTGKETSVNELFDIIKHEIGFRGEA-IYDKPREGEVYRIYLDIKKAE-SLGWKPEIDLKEGIKRVVNW 298
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: YFNG_BACSU (Putative sugar dehydratase/epimerase yfnG OS=Bacillus subtilis GN=yfnG PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 6.263e-18 Identity = 75/259 (28.96%), Postives = 114/259 (44.02%), Query Frame = 3 Query: 12 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRG-----KNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 773 V HLAAQA V A +NP S +NI G +LEAC+ ++ ASS YG EN+P+ E + Q Y +K + I+HTY H YGL + R +YG +F R I Q + V G ++ RD+ YI+D V+ L G A FN N +TV +LV + + + K V+ G+ ++ + + A+K + P + GL+K + WY ++ Sbjct: 80 VFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQENLPYDE-NMPLQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGG------GDLNFNRIIPQTIQL-VLNGEAPEIRSDGTFVRDYFYIEDAVQAYL-----LLAEKMEENNLAGEA----FNFSNEIQLTVLELVEKILKKMNSNLKPKVLNQ-GSNEIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTEFF 320
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: VIPB_SALTI (Vi polysaccharide biosynthesis protein vipB/tviC OS=Salmonella typhi GN=vipB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.060e-17 Identity = 67/261 (25.67%), Postives = 127/261 (48.66%), Query Frame = 3 Query: 9 HVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFS----FTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMP-----GNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYL 764 +V+H AA V ++++P + +NI G + +L A + A+ S +A+SSS YG + ++P E +R +P S YA TK E A + Y + GLR+F V+G P+ AY + + ++L+ +PI + +RDF YI+++++ L S + +++N+ ++ +L ++ L + + P +GDV + A+I+ + Y P D++ GLK+ ++WY+ Sbjct: 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAASSSTYGDHPDLPKIE-ERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYI---NGDGSTSRDFCYIENVIQANLLSATTNDL----------ASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI 338
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.557e-13 Identity = 68/251 (27.09%), Postives = 119/251 (47.41%), Query Frame = 3 Query: 12 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVN-ILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWY 761 V+HLAA++ V ++ + +V +N+ G TLL+A + + S V S+ VYG E+ ++E D +P S Y+A+K +G+ +A ++ +GL + R YGP P+ F ++ G + +Y +V R++ ++DD V+G RG A R++N+G + ++ +LV +LE +E D + + + Q+E G+ P DL GL V WY Sbjct: 79 VVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAA-TRHGVASFVQVSTDEVYGSLEHGSWTE-DEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPEKLIPRFITLLMDGHRVPLYGDGLNV---REWLHVDDHVRG------------IEAVRTRGRAG-RVYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYA-VDSTRIQRELGFAPAVDLADGLAATVAWY 310
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: GALE_CORGL (UDP-glucose 4-epimerase OS=Corynebacterium glutamicum GN=galE PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13 Identity = 71/256 (27.73%), Postives = 122/256 (47.66%), Query Frame = 3 Query: 3 FTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNI-LQGKPITVYRGKNHV----------DLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPT-TDLQT 734 F V+H AA++ V +++ P+ Y H N+ +TLL+A + A+ ++V++S+++ YG + VP +E D QP + Y ATK + + +Y +GL+ T LR+F V G +G T I L + T +R K + RD+ +I D+ K + +L+ +RIFNLG+ +V ++V + R + + GD A+ A++E G+ P TDL+T Sbjct: 65 FEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMR-AHGVNNLVFSSTAATYGEPDVVPITE-DMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYFNVAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAVRDYIHILDLAKAHVLALE-----------SNEAGKHRIFNLGSGDGYSVKQVVEMC-REVTGHPIPAEVAPRRAGDPATLIASSEKAKQELGWTPEHTDLRT 306
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13 Identity = 63/256 (24.61%), Postives = 104/256 (40.62%), Query Frame = 3 Query: 12 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNE---NVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANI---SSAQKEFGYRPTTDLQTGLKKFVRWY 761 +MH AAQ V + N + +NI G LLEACK + S+ VYG + +V EA + P + Y+ATK E + Y YGL + R VYGP P+ F + GKP+ ++ ++V R + Y +D+ + +G + ++N+G T V + N + + + + + PF K+ G+ T+ + GL+K + WY Sbjct: 84 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDASVGNHEASQL-LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMNGKPLPIHGDGSNV---RSYLYCEDVAEA------------FEVVLHKGEVNH-VYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENR---PFNDQRYFLDDQKLKKLGWCERTNWEEGLRKTMEWY 319
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: GALE_CORDI (UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae GN=galE PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12 Identity = 70/260 (26.92%), Postives = 114/260 (43.85%), Query Frame = 3 Query: 3 FTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDL---------------ARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRP-TTDLQT 734 F V+H AA++ V +++ P Y N+ + LL+A K N + +IV++S+++ YG E VP +E D P + Y ATK + + +Y H YG + T LR+F V G +G T I P+ + H D RD+ +I D+ + +L +RIFNLG+ +V ++++ R + + GD A+ + AQ E G++P TDL T Sbjct: 65 FDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVR-NIVFSSTAATYGEPETVPITE-DAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYFNVAGAYGLVGENREIETHLI----PLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLADAHILALQSNV-----------EGSHRIFNLGSGEGYSVKQVIDTC-REVTGHLIPAEVAPRRAGDPAVLIASSAKAQSELGWKPQRTDLHT 306
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12 Identity = 61/255 (23.92%), Postives = 102/255 (40.00%), Query Frame = 3 Query: 12 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSVYGLNENVPFSEADRTDQ--PASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANI---SSAQKEFGYRPTTDLQTGLKKFVRWY 761 +MH AAQ V + N + +NI G LLEACK + S+ VYG + Q P + Y+ATK E + Y YGL + R VYGP P+ F + GKP+ ++ ++V R + Y +D+ + +G + ++N+G +++++ K+ K + + PF K+ G++ T+ + GLKK + WY Sbjct: 86 IMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKMIPKFILLAMSGKPLPIHGDGSNV---RSYLYCEDVAEA------------FEVVLHKGEIGH-VYNVGTKRE---RRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLKKLGWQERTNWEDGLKKTMDWY 321
BLAST of FC871119 vs. ExPASy Swiss-Prot
Match: RFFG_HAEIN (dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae GN=rffG PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11 Identity = 70/273 (25.64%), Postives = 115/273 (42.12%), Query Frame = 3 Query: 12 VMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKS--------ANPQPSIVWASSSSVYGLNENVPFSEADRTDQ----PASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITVYRGKNHVDLARDFTYIDDIVKGCLGSLDXXXXXXXXXXXXRGPAPYRI-FNLGNTSPVTVPKLVNILE-------RHLKV--KAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYL 764 VMHLAA++ V ++ +V +NI G TLLE K+ S+ VYG ++ SE T+Q P+S Y+A+K A + ++ YGL + YG + + N + GKP+ +Y + RD+ +++D V+ L R Y I N T+ V ++ +LE H+K V + PG+ DV ++ + S E G++P + GL++ V+WYL Sbjct: 78 VMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWHTLDEAKKTTFRFHHISTDEVYG---DLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRTYGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYGDGQQI---RDWLFVEDHVQASYLVL----------TKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLMTFVKDRPGH-DVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYL 332 The following BLAST results are available for this feature:
BLAST of FC871119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871119 ID=FC871119; Name=FC871119; organism=Citrus sinensis; type=EST; length=897bpback to top |