FC871115
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871115 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.814e-11 Identity = 51/173 (29.48%), Postives = 77/173 (44.51%), Query Frame = 3 Query: 84 SWDPTLVNPCTWFHVTCDSNN-HVIRLDLGNSNISGTLGPEVGQ-LQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP-------------------VDGPFRSFPMESFENNKL 539 +W+ T+ +W +TC NN V L L S + G L + + L L+ + L N + G IP + +L + S+ ++N G IP ++ L L L+ N L+G+IP L L+ L + NN L G IP V +SFP SF+ N L Sbjct: 46 NWNSTIPICASWTGITCSKNNARVTALRLPGSGLYGPLPEKTFEKLDALRIISLRSNHLQGNIPSVILSLPFIRSLYFHENNFSGTIPPVLSH--RLVNLDLSANSLSGNIPTSLQNLTQLTDLSLQNNSLSGPIPNLPPRLKYLNLSFNNLNGSVPSSVKSFPASSFQGNSL 216
BLAST of FC871115 vs. ExPASy Swiss-Prot
Match: TMM_ARATH (Protein TOO MANY MOUTHS OS=Arabidopsis thaliana GN=TMM PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 40/88 (45.45%), Postives = 51/88 (57.95%), Query Frame = 3 Query: 222 LQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 485 LQ L L N G IP ELGNL +L +D+++N L G IP SF L+ L L+ N+LTGSIP L L V D++ N L G +P Sbjct: 161 LQTLVLRENGFLGPIPDELGNLTNLKVLDLHKNHLNGSIPLSFNRFSGLRSLDLSGNRLTGSIPG--FVLPALSVLDLNQNLLTGPVP 246
BLAST of FC871115 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.982e-11 Identity = 60/207 (28.99%), Postives = 96/207 (46.38%), Query Frame = 3 Query: 6 ALSTNSEGNALHALRSRFKDPTNVLQSWDPTLVNPC--TWFHVTCDSNNHVIRLDLGNSNISGTLGPEVGQLQHL----------------------QYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV--DGPFRSFPMESFENNKLNGP 548 AL+ + A+++L + P +L W + +PC +W V C+++ V + L ++N+ G LG + L Q L L N+ +G IP+ L +LKSL M + N L G+IP F +L + + L++N L+G +P + LS L + NN L G + V D P + + ENN NGP Sbjct: 31 ALTNPDDVAAINSLFLALESP--LLPGWVASGGDPCGESWQGVLCNASQ-VETIILISANLGGELGVGLNMFTSLKAMDFSNNHIGGSIPSTLPVSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGELDVLQDLPLKDL---NVENNLFNGP 231
BLAST of FC871115 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.506e-11 Identity = 42/111 (37.84%), Postives = 59/111 (53.15%), Query Frame = 3 Query: 162 DLGNSNISGT-LGPEV--GQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 485 +L N+ G LGPEV +L + L N KIP+++ L L S+D+ NK G IP+ +L SL+ L L N L+GS+P S L++ DVS N L G +P Sbjct: 180 NLQELNLGGNKLGPEVVPSLASNLITISLKNNSFGSKIPEQIKKLNKLQSLDLSSNKFTGSIPRFLLSLPSLQNLSLAQNLLSGSLPNSSLCNSKLRILDVSRNLLTGKLP 290 The following BLAST results are available for this feature:
BLAST of FC871115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 104
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Sequences
The
following sequences are available for this feature:
EST sequence >FC871115 ID=FC871115; Name=FC871115; organism=Citrus sinensis; type=EST; length=825bpback to top |