EY680423

Overview
NameEY680423
Unique NameEY680423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30
Identity = 66/174 (37.93%), Postives = 97/174 (55.75%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+   + RN         F+ Y +F+TA   +   GFGTTG    + +EI AFLA    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  +LLN+P+ +  +  ++F++A W WMTP ++P+    D   G+W+P
Sbjct:   81 FDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVITGRWQP 249          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.236e-30
Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+   + RN       G F+ Y +FI+A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  +LLN+P+ +  ++ ++F++A W WMTP ++P+    D   G+W+P
Sbjct:   75 FDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTP-QSPKPSCHDVITGRWQP 243          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+     RN     A GF+ Y +F+ A   +   GFGTTG+   + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  PC PG  YYGRG I +  NYNYG  G A+  +LL +P+ +  + T++F+ A W WMT  + P+        GQW P
Sbjct:   89 FDRMLLHRNDGACQAKGFYTYDAFVAAAGAFP--GFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTA-QAPKPSSHAVITGQWSP 256          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 67/174 (38.51%), Postives = 99/174 (56.90%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQ-SYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+     RN     A GF+ Y +F+ A   Y    F TTG      +E+ AFLA    +T+ G+  A  GP +WG C+  E + +  +YC+   K  +PC  G +YYGRG I I +NYNYG  G+A+ ++LLN+P+ +  +AT++F+ AFW WMTP ++P+        GQW P
Sbjct:   85 FDQMLLHRNDQACAAKGFYTYDAFVAAANAYPD--FATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEP--KPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVITGQWTP 253          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 66/178 (37.08%), Postives = 99/178 (55.62%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEPPQN 781
            F+     RN     A  F+ Y +F+ A   +    F TTG    + +E+ AFLA    +T+ G+  A  GP +WG C+  E + +    YC  S ++  PC  G +YYGRG I I +NYNYG  G+A+ +NLL++P+ +  +AT++F+ AFW WMTP ++P+        GQW P  N
Sbjct:   88 FDQMLLHRNDAACPAKNFYTYDAFVAAANAFP--SFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVMTGQWTPNGN 260          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 132.494 bits (332), Expect = 2.920e-30
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+     RN     A GF+ Y +F+ A   ++  GFGTTG    + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  PC PG  YYGRG I +  NYNYG  G A+  +LL +P+ +  + T++F+ A W WMT  + P+        GQW P
Sbjct:   86 FDRMLLHRNDGACQAKGFYTYDAFVAAASAFR--GFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTA-QAPKPSSHAVITGQWSP 253          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.814e-30
Identity = 67/183 (36.61%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  224 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            T+S       F N    RN        F+ Y +F++A   +    F   G    K +EI AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S ++  PC  G +YYGRG I I WNYNYG  G A+  +LLN+P+ +  +  ++F+ A W WMTP ++P+    D   G W P
Sbjct:   67 TLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFP--NFANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPS-TYCQASSEF--PCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVITGGWTP 243          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.981e-30
Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+   + RN         F+ Y +FI+A   +   GFGTTG    + +EI AFLA    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  +LLN+P+ +  ++ ++F++A W WMTP ++P+    D   G+W+P
Sbjct:   77 FDQMLNHRNDNACQGKNNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQP 245          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.110e-29
Identity = 65/174 (37.36%), Postives = 95/174 (54.60%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+     RN         F+ Y +FI A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  +LLN+P+ +  +  ++F++A W WMTP ++P+    D  +G+W+P
Sbjct:   87 FDQMLKHRNDNACQGKNNFYSYNAFINAARSFG--GFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVIIGRWQP 255          
BLAST of EY680423 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.449e-29
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  254 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKANLLNHPEYIEQNATLAFEAAFWKWMTPFKNPRLPPPDAFVGQWEP 772
            F+     RN        F+ Y +FI A   +   GFGT+G    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  +LLN+P+ +  +  ++F+ A W WMTP ++P+    D  +G+W P
Sbjct:   88 FDQMLKHRNENSCQGKNFYSYNAFINAARSFP--GFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVIIGRWNP 255          
The following BLAST results are available for this feature:
BLAST of EY680423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHIC_SOLLC2.236e-3037.93Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_SOLTU2.236e-3037.93Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHIA_SECCE2.920e-3036.99Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI3_ORYSJ2.920e-3038.51Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_ORYSJ2.920e-3037.08Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_HORVU2.920e-3036.9926 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHI2_PEA3.814e-3036.61Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI3_SOLTU4.981e-3037.93Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHI4_SOLTU1.110e-2937.36Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_SOLTU1.449e-2936.99Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680423 ID=EY680423; Name=EY680423; organism=Citrus sinensis; type=EST; length=849bp
CCACGCGTCCGGAACAACAGGTAGATCTGGTGAGAACGAGAAAATGAAGA
TGAAGAATGGCAGTGTGGCAATGACACTGACAGTGGCACTAGTACTGGCA
CTGGCAGTGAGTTTGGCAAATGGAGATGAATCAGAGAAGGTGATAGTGAA
GAAGTTGAAGGGGAAAAAAGTTTGCATAAAAGGGTGGGAGTGCCCAACAT
GGTCGAAATTCTGCTGTAACGAGACGATATCAGACTATTTCCAGGTTTAC
CAGTTTGAGAATTTCTTCTCGAAAAGGAACACGCCGGTGGCACATGCCGT
GGGATTCTGGGATTATCAGTCTTTCATTACTGCCACCGTCAAATATCAGC
CCCTCGGCTTCGGTACCACCGGTACTAAGCTTGATAAGATGAAGGAGATT
TGCGCTTTTCTTGCCCACGTGGGCTGCAAGACCTCTTGTGGATATGGAGT
GGCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAACCATGAAATGA
GCCCCAGTCAGTCATATTGTGATGATTCCTACAAATACACATATCCCTGC
ACCCCTGGAGCTGAGTACTATGGCCGAGGTGCTATACCTATATACTGGAA
CTATAACTATGGAGCCACTGGGGAAGCATTGAAAGCAAATCTGTTGAATC
ATCCCGAATACATTGAGCAGAATGCTACCCTTGCCTTTGAGGCTGCATTT
TGGAAGTGGATGACCCCATTCAAAAATCCCCGCCTTCCGCCCCCTGATGC
CTTTGTTGGCCAATGGGAACCCCCCCAAAATGGAACCTTTGTCCCAAACG
GGGACCCAAATTTTTGGTACCCAAATGAAAAATCCCCTATGGGGGGAAA
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