CX300812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NDUS1_PONAB (NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Pongo abelii GN=NDUFS1 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.513e-36 Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 43 TLIMKTINLTIDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEVDTIEKPVASCATEAKGGMDVYTNNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKTKEDRLCNPFIK 477 T I + +D V V +++++CE G+ +PRFCYHE LSV+GNCRMC+VE++ K VA+CA G ++ TN+ KKARE V+E LL NHPLDCPICDQ GECDLQDQ +G+ ++RF K+ ED+ P +K Sbjct: 26 TAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQIPRFCYHERLSVAGNCRMCLVEIEKAPKVVAACAMPVMKGWNILTNSEKSKKAREGVMELLLANHPLDCPICDQGGECDLQDQSMMFGNDRSRFLEGKRAVEDKNIGPLVK 170
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NDUS1_DICDI (NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium discoideum GN=nad11 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.240e-30 Identity = 67/145 (46.21%), Postives = 91/145 (62.76%), Query Frame = 1 Query: 61 INLTIDNILVEVSEK---LSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEVDTIEKPVASCATEAKGGMD---VYTNNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKTKEDRLCNPFIK 477 I I+ I EV+E+ ++I+++C G+ +PRFCYHE L+++GNCRMC+V V EK +A+C D + T + KARE V+EFLL+NHPLDCPICDQ GECDLQ+Q AYG RF+ K+ E + IK Sbjct: 3 IRFKINEIECEVNEEKEDITILQACTANGIEIPRFCYHEKLTIAGNCRMCLVYVTNEEKLLAACGIPLDENFDDESIETEIDEILKAREGVMEFLLINHPLDCPICDQGGECDLQEQTLAYGLDTGRFYIKKRAVEIKTFGRLIK 147
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NDUS1_DICCI (NADH-ubiquinone oxidoreductase 75 kDa subunit OS=Dictyostelium citrinum GN=nad11 PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.240e-30 Identity = 68/145 (46.90%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 61 INLTIDNILVEVSEK---LSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEVDTIEKPVASCATEAKGGMD---VYTNNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKTKEDRLCNPFIK 477 I I+ I EV E+ L+I+++C G+ +PRFCYHE L+++GNCRMC+V V EK +A+C D + T + KARE V+EFLL+NHPLDCPICDQ GECDLQ+Q AYG RF+ K+ E + IK Sbjct: 3 IRFKINEIECEVDEEKEDLTILQACTANGIEIPRFCYHEKLTIAGNCRMCLVYVTNEEKLLAACGIPLDENFDDESIETEIDEILKAREGVMEFLLINHPLDCPICDQGGECDLQEQTIAYGLDTGRFYIKKRAVEVKAFGRLIK 147
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NUOG_STRCO (NADH-quinone oxidoreductase subunit G OS=Streptomyces coelicolor GN=nuoG PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.161e-28 Identity = 59/132 (44.70%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 61 INLTIDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEVDTIEKPVASCATEAKGGMDVYTN--NAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKTKE 450 + LTID + V + +I + E G+ +PRFC H +L +G CR C+VEV+ KP+ASC GM V T + +KA+ V+E LL+NHPLDCP+CD+ GEC LQ+Q ++G S +RF G K+T E Sbjct: 22 VTLTIDGAEISVPKGTLVIRAAEQLGIEIPRFCDHPLLDPAGACRQCIVEVEGQRKPMASCTITCTDGMVVKTQLTSPVAEKAQHGVMELLLINHPLDCPVCDKGGECPLQNQAMSHGQSDSRFEGKKRTYE 153
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NUOG_MYCTU (NADH-quinone oxidoreductase subunit G OS=Mycobacterium tuberculosis GN=nuoG PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 3.735e-27 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 61 INLTIDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEVDTIEKPVASCATEAKGGMDVYT--NNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKT 444 + LTID + + V + +I + EL G+ +PRFC H +L G CR C+VEV+ KP+ASC T A M V T + KA+ V+E LL+NHPLDCP+CD+ GEC LQ+Q + G + +RF K+T Sbjct: 17 VTLTIDGVEISVPKGTLVIRAAELMGIQIPRFCDHPLLEPVGACRQCLVEVEGQRKPLASCTTVATDDMVVRTQLTSEIADKAQHGVMELLLINHPLDCPMCDKGGECPLQNQAMSNGRTDSRFTEAKRT 146
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NUOG_MYCBO (NADH-quinone oxidoreductase subunit G OS=Mycobacterium bovis GN=nuoG PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.735e-27 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 61 INLTIDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEVDTIEKPVASCATEAKGGMDVYT--NNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKT 444 + LTID + + V + +I + EL G+ +PRFC H +L G CR C+VEV+ KP+ASC T A M V T + KA+ V+E LL+NHPLDCP+CD+ GEC LQ+Q + G + +RF K+T Sbjct: 17 VTLTIDGVEISVPKGTLVIRAAELMGIQIPRFCDHPLLEPVGACRQCLVEVEGQRKPLASCTTVATDDMVVRTQLTSEIADKAQHGVMELLLINHPLDCPMCDKGGECPLQNQAMSNGRTDSRFTEAKRT 146
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NUOG2_RHIME (NADH-quinone oxidoreductase subunit G 2 OS=Rhizobium meliloti GN=nuoG2 PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 6.370e-27 Identity = 53/122 (43.44%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 61 INLTIDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEVDTIEKPVASCATEAKGGMDVYTNNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARF 426 I +TID +EV +++ + E G+ +P FCY + L +CRMC+VE++ + + +CAT A GM V TN +++ R ++++ LL NHPLDCPICD+ GEC+LQD V AYG ++RF Sbjct: 2 IKVTIDEQSLEVEAGSTVLAAAERLGIEIPTFCYWKRLPPLASCRMCLVEIEGLRRLQPACATVAADGMVVRTNTPLIEETRSSMLDMLLANHPLDCPICDKGGECELQDMVMAYGPGESRF 123
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NUOG_BUCBP (NADH-quinone oxidoreductase subunit G OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=nuoG PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.062e-21 Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 73 IDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEV-----DTIEKPVASCATEAKGGMDVYTNNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKTKEDRLCNPFI 474 +DN V + +++++C +G+ +P FC+H +L G+CR C V + D + + V SC T GM V T++ + R+ ++E L+LNHP DCPIC++ G C LQD G + R+ K+T +++ FI Sbjct: 6 VDNEEYNVDKSDNLLQACLSSGINIPYFCWHPVLGSIGSCRQCAVTIYKDLEDKVGQLVMSCMTSVLDGMIVSTSDKISRNFRKGIIELLMLNHPHDCPICEEGGSCHLQDMTVMAGHTVRRYRFTKRTHKNQYLGHFI 144
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NUOG_SHIFL (NADH-quinone oxidoreductase subunit G OS=Shigella flexneri GN=nuoG PE=3 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 3.386e-20 Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 52 MKTINLTIDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEV-----DTIEKPVASCATEAKGGMDVYTNNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKTKEDRLCNPFI 474 M TI+ +D EV+ +++E+C G+ +P FC+H L G CR C V+ DT + V SC T A G + ++ K+ RE+VVE+L+ NHP DCP+C++ G C LQD G S R+ K+T ++ PFI Sbjct: 1 MATIH--VDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFI 144
BLAST of CX300812 vs. ExPASy Swiss-Prot
Match: NUOG_ECOLI (NADH-quinone oxidoreductase subunit G OS=Escherichia coli (strain K12) GN=nuoG PE=1 SV=4) HSP 1 Score: 97.4413 bits (241), Expect = 3.386e-20 Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 52 MKTINLTIDNILVEVSEKLSIIESCELAGVVVPRFCYHEILSVSGNCRMCVVEV-----DTIEKPVASCATEAKGGMDVYTNNAFVKKARENVVEFLLLNHPLDCPICDQAGECDLQDQVKAYGSSQARFFGLKKTKEDRLCNPFI 474 M TI+ +D EV+ +++E+C G+ +P FC+H L G CR C V+ DT + V SC T A G + ++ K+ RE+VVE+L+ NHP DCP+C++ G C LQD G S R+ K+T ++ PFI Sbjct: 1 MATIH--VDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGACRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHDCPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFI 144 The following BLAST results are available for this feature:
BLAST of CX300812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300812 ID=CX300812; Name=CX300812; organism=Citrus sinensis; type=EST; length=477bpback to top |