CX300809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.290e-55 Identity = 101/139 (72.66%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+VK AGKD FH+R+RVHP+HVLRINKMLSCAGADR+Q+GMRGAFGK G ARV IGQ+LLSVRCK + H EALRRAK+KFPGRQKI++S+ WGFTKF + +Y KL+ Sbjct: 47 PFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAEYTKLR 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 1.290e-55 Identity = 101/139 (72.66%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA+RI+CNKY+VK AGKD FH+R+RVHP+HVLRINKMLSCAGADR+Q+GMRGAFGK G ARV IGQ+LLSVRCK + H EALRRAK+KFPGRQKI++S+ WGFTKF + D+ KL+ Sbjct: 47 PFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADFTKLR 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 4.900e-55 Identity = 100/139 (71.94%), Postives = 118/139 (84.89%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 P CVHLVS EKE +SSEALEA RI+CNKY+VKFAGKD FH+RVRVHP+HVLR NKMLSCAGADR+Q+GMRGAFGKPQG ARV IGQ+LLSVR + + H EALRRAK+KFPGR+KI++++ WGFTK+ + DY K K Sbjct: 47 PFCVHLVSWEKENVSSEALEAGRIACNKYMVKFAGKDGFHLRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWK 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_DROME (60S ribosomal protein L10 OS=Drosophila melanogaster GN=Qm PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 7.076e-54 Identity = 99/140 (70.71%), Postives = 117/140 (83.57%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLKD 420 P CVHLVS E EQLSSEALEA RI CNKY+VK+ GKD FH+R+R+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV IGQ ++SVR V EALRRAK+KFPGRQKI +SK WGFTK+ +E Y++L+D Sbjct: 47 PLCVHLVSDEYEQLSSEALEAGRICCNKYLVKYCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRD 186
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_BOMMA (60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.022e-52 Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLKD 420 P CVHLVS E EQLSSEALEA RI CNKY+VK GKD FH+R+R+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV IGQ ++SVR V EALRRAK+KFPGRQKI +SK WGFTK+ +++++KL++ Sbjct: 47 PLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLRE 186
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_CAEEL (60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.883e-52 Identity = 96/139 (69.06%), Postives = 117/139 (84.17%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 PACVH++S E+E LSSEALEA+RI NKY+VK GKD FH+RVR HP+HV RINKMLSCAGADR+Q+GMRGA+GKPQGLVARV+IG IL S+R K+ V H EA RRAK+KFPGRQ IV S+ WGFTK+ +EDY++++ Sbjct: 47 PACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTKWDREDYERMR 185
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_SHEEP (60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 8.650e-52 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PIG (60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3) HSP 1 Score: 201.83 bits (512), Expect = 8.650e-52 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_BOVIN (60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4) HSP 1 Score: 201.83 bits (512), Expect = 8.650e-52 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10L_MACFA (60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 8.650e-52 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK G+D FHMRVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184 The following BLAST results are available for this feature:
BLAST of CX300809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300809 ID=CX300809; Name=CX300809; organism=Citrus sinensis; type=EST; length=420bpback to top |