CX300809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_RAT (60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 1.130e-51 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PONAB (60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 1.130e-51 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PAPAN (60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.130e-51 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_MOUSE (60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 1.130e-51 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_MACFA (60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.130e-51 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_HUMAN (60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4) HSP 1 Score: 201.445 bits (511), Expect = 1.130e-51 Identity = 96/138 (69.57%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10L_MOUSE (60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.475e-51 Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQ 408 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFE 182
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10L_BOVIN (60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 1.475e-51 Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQ 408 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ Sbjct: 47 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFE 182
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_CHICK (60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.517e-51 Identity = 95/138 (68.84%), Postives = 116/138 (84.06%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 P C H+VS E EQLSSEALEA+RI NKY+VK GKD FH+RVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV++GQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF + ++++ Sbjct: 42 PLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHMGQVIMSIRTKAQNKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEEM 179
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10A_SCHPO (60S ribosomal protein L10-A OS=Schizosaccharomyces pombe GN=rpl10a PE=2 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 1.249e-50 Identity = 91/135 (67.41%), Postives = 114/135 (84.44%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDY 405 P C+HLVS E EQ++SEALEA+RI NKY+VK GKD FH+RVR HP+HV+RINKMLSCAGADR+Q+GMR AFGKP GLVARVNIGQIL+SVR K S+ EALRR +YKFPG+Q+I++SK WGF+++ +++Y Sbjct: 47 PLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQILMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEY 181 The following BLAST results are available for this feature:
BLAST of CX300809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300809 ID=CX300809; Name=CX300809; organism=Citrus sinensis; type=EST; length=420bpback to top |