CX300809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10B_SCHPO (60S ribosomal protein L10-B OS=Schizosaccharomyces pombe GN=rpl10b PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.631e-50 Identity = 90/135 (66.67%), Postives = 114/135 (84.44%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDY 405 P C+HLVS E EQ++SEALEA+RI NKY+VK GKD FH+RVR HP+HV+RINKMLSCAGADR+Q+GMR AFGKP GLVARVNIGQ+L+SVR K S+ EALRR +YKFPG+Q+I++SK WGF+++ +++Y Sbjct: 47 PLCIHLVSNEYEQITSEALEAARICANKYLVKIGGKDSFHLRVRAHPFHVVRINKMLSCAGADRLQTGMRHAFGKPNGLVARVNIGQVLMSVRTKDSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEY 181
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10L_HUMAN (60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 2.130e-50 Identity = 94/134 (70.15%), Postives = 114/134 (85.07%), Query Frame = 1 Query: 13 HLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKL 414 H+VS E EQLSSEALEA+RI NKY+VK G+D FHMRVR+HP+HV+RINKMLSCAGADR+Q+GMRGAFGKPQG VARV+IGQ+++S+R K HV EALRRAK+KFPGRQKI ISK WGFTKF ++++ + Sbjct: 51 HMVSDEYEQLSSEALEAARICANKYMVKSCGRDGFHMRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDM 184
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_YEAST (60S ribosomal protein L10 OS=Saccharomyces cerevisiae GN=RPL10 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 6.199e-50 Identity = 94/140 (67.14%), Postives = 112/140 (80.00%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLKD 420 P CVHLVS E EQLSSEALEA+RI NKY+ +G+D FH+RVRVHP+HVLRINKMLSCAGADR+Q GMRGA+GKP GL ARV+IGQI+ SVR K S V E LRRA+YKFPG+QKI++SK WGFT + +Y K ++ Sbjct: 47 PLCVHLVSNELEQLSSEALEAARICANKYMTTVSGRDAFHLRVRVHPFHVLRINKMLSCAGADRLQQGMRGAWGKPHGLAARVDIGQIIFSVRTKDSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKRE 186
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_EUGGR (60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.520e-45 Identity = 87/140 (62.14%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLKD 420 P HL+S+E+EQ+ SEALEA+RI+ NKY++K AGK+ +H+RVRVHP+HV RINKMLSCAGADR+Q GMRGAFGKP GL ARV IGQ L+S+R K V AL+RA YKF GRQ I S WGFT+ E+Y K K+ Sbjct: 47 PLTYHLISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINKMLSCAGADRLQQGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKE 186
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_ENCCU (60S ribosomal protein L10 OS=Encephalitozoon cuniculi GN=RPL10 PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 5.620e-43 Identity = 84/140 (60.00%), Postives = 106/140 (75.71%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLKD 420 P V+ +S E+E LS+EALEA+RI NKY+VK AGKD FH+R+RV+P+HVLRINKMLSCAGADR+Q+GMRG+FGKP G ARV Q +LS+R K+S EALRRAK KFPG QKI +S +GFT +++ KL + Sbjct: 47 PLLVNCISNERENLSAEALEAARICANKYMVKHAGKDNFHLRIRVYPFHVLRINKMLSCAGADRLQTGMRGSFGKPYGRAARVVFNQPILSIRTKESFRDAAVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNE 186
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_TOBAC (60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 2.135e-42 Identity = 79/106 (74.53%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 100 AGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISKNWGFTKFLKEDYQKLK 417 AGKD FH+RVRVHP+HVLRINKMLSCAGADR+Q+GMRGAFGKPQG+ ARV IGQ+LLSVRCK H EALRRAK+KFP RQKI++S+ WGFTKF + DY K K Sbjct: 9 AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYK 114
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_METKA (50S ribosomal protein L10e OS=Methanopyrus kandleri GN=rpl10e PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.242e-26 Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = 1 Query: 10 VHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISK 369 V LV+ E+ Q++ ALEA+R++ N+Y+ K G+ +H+++RV+P+HVLR N + + AGADRVQ GMR AFGKP G ARV GQ +++VR H EALRRA KFP IV+ K Sbjct: 47 VSLVARERAQVTHNALEAARVAANRYLTKTVGRQNYHLKIRVYPHHVLRENPLATGAGADRVQEGMRLAFGKPIGTAARVREGQRVVTVRIDPENFEHAKEALRRAGMKFPFPFTIVVDK 166
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_AERPE (50S ribosomal protein L10e OS=Aeropyrum pernix GN=rpl10e PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24 Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 16 LVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVI 363 LV LE Q+ ALEA+RI+ NKY+ G F+ R+RV+P+HV+R NKM++ AGADR+Q GMR AFGKP G ARV G ++L V ++ +V EALRR KFP +IVI Sbjct: 51 LVMLEAGQIRHNALEAARIAVNKYLATTIGDKNFYFRIRVYPHHVIRENKMMAFAGADRLQDGMRQAFGKPVGTAARVYPGTVVLEVWARKGDEENVKEALRRGASKFPLPSRIVI 166
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_STAMF (50S ribosomal protein L10e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.008e-24 Identity = 57/115 (49.57%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 16 LVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIV 360 LV +E Q+ ALEA+R+ NKY+ G + +++RV+P+HVLR NKM++ AGADR+Q GMR AFGKP G ARV G I++ VR ++ V H EALRRA K P +IV Sbjct: 49 LVMIEAGQIRHNALEAARVMANKYLSSTVGDQNYFLKIRVYPHHVLRENKMMAFAGADRLQDGMRQAFGKPIGTAARVYPGTIVMEVRVRKEHVEHAKEALRRAASKLPLPARIV 163
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PYRAE (50S ribosomal protein L10e OS=Pyrobaculum aerophilum GN=rpl10e PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.630e-24 Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 16 LVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVI 363 LV E+ Q+ +ALEA+R +KY+ K+ G +++R+ V P+HVLR N+ML+ AGADR+Q GMR AFG P G ARV GQ+L K +PH+ EALRRA K P +IVI Sbjct: 53 LVVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEALRRAASKLPLPTRIVI 168 The following BLAST results are available for this feature:
BLAST of CX300809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300809 ID=CX300809; Name=CX300809; organism=Citrus sinensis; type=EST; length=420bpback to top |