CX300809
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PYRFU (50S ribosomal protein L10e OS=Pyrococcus furiosus GN=rpl10e PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.394e-17 Identity = 47/111 (42.34%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 10 VHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFP 342 V L + E Q+ ALEA+R N+Y+ K G+ +H ++RV+P+ VLR N M + ADR +GMR FGKP GL AR+ Q +LS+R + + E RRA KFP Sbjct: 47 VSLHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKILSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_HALMA (50S ribosomal protein L10e OS=Haloarcula marismortui GN=rpl10e PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.394e-17 Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDV-FHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISK 369 P + L+ E QL +LEASR+S N++++K G++ + M +R P+ VLR NK + AGADRV GMR AFGK G ARV G+ L + C HV EA RRA K +I + + Sbjct: 47 PVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRIKVER 170
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PYRHO (50S ribosomal protein L10e OS=Pyrococcus horikoshii GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.820e-17 Identity = 47/111 (42.34%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 10 VHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFP 342 V L + E Q+ ALEA+R N+Y+ K G+ +H ++RV+P+ VLR N M + ADR +GMR FGKP GL AR+ Q +LS+R + + E RRA KFP Sbjct: 47 VALHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKRDQKILSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.105e-17 Identity = 48/123 (39.02%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISK 369 P + LV E+ QL +LEA+R+S N++++K G+ + M++R P+ ++R NK + AGADRV GMR AFG P G AR+ G L + C+ V EA RRA K KI + + Sbjct: 47 PVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.105e-17 Identity = 48/123 (39.02%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISK 369 P + LV E+ QL +LEA+R+S N++++K G+ + M++R P+ ++R NK + AGADRV GMR AFG P G AR+ G L + C+ V EA RRA K KI + + Sbjct: 47 PVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_THEON (50S ribosomal protein L10e OS=Thermococcus onnurineus (strain NA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.296e-17 Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 19 VSLEKEQ---LSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFP 342 VSL EQ + ALEA RI N+Y+ K G+ +H ++RV+P+ VLR N M + ADR +GMR FGKP GL ARV Q +L+V + + EA+RRA K P Sbjct: 47 VSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVKKDQKILTVWVNEGHLKFALEAMRRAAMKLP 157
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_PYRAB (50S ribosomal protein L10e OS=Pyrococcus abyssi GN=rpl10e PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.034e-17 Identity = 44/102 (43.14%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 37 QLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFP 342 Q+ ALEA+R N+Y+ K G+ +H ++RV+P+ VLR N M + ADR +GMR FGKP GL AR+ Q +LS+R + + E RRA KFP Sbjct: 56 QIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.541e-16 Identity = 47/123 (38.21%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 1 PACVHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDVFHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARVNIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVISK 369 P + L E+ Q+ +LE+SR+S N++++K G+ + M +R P+ V+R NK + AGADRV GMR AFGKP G AR+N I+ + C V EA RRA K +I + + Sbjct: 47 PVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGKPVGTAARLNKDDIVFTAYCDVEQASVVKEAFRRAYNKLSPPCRITVDR 169
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_SULIY (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 10 VHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDV-FHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARV-NIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVI 363 V L++ E Q+ ALEA R K + K G + F M + +P+HVLR NKM++ AGADR+Q GMR +FG P G AR+ +G+IL+ V+ K+ + EAL+ A K P R +I I Sbjct: 47 VRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRIEI 166
BLAST of CX300809 vs. ExPASy Swiss-Prot
Match: RL10_SULIN (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl10e PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.013e-16 Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 10 VHLVSLEKEQLSSEALEASRISCNKYIVKFAGKDV-FHMRVRVHPYHVLRINKMLSCAGADRVQSGMRGAFGKPQGLVARV-NIGQILLSVRCKQSAVPHVTEALRRAKYKFPGRQKIVI 363 V L++ E Q+ ALEA R K + K G + F M + +P+HVLR NKM++ AGADR+Q GMR +FG P G AR+ +G+IL+ V+ K+ + EAL+ A K P R +I I Sbjct: 47 VRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRIEI 166 The following BLAST results are available for this feature:
BLAST of CX300809 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300809 ID=CX300809; Name=CX300809; organism=Citrus sinensis; type=EST; length=420bpback to top |