CX300804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_CAEEL (60S ribosomal protein L8 OS=Caenorhabditis elegans GN=rpl-8 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.567e-16 Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMNPV+HPHGGGN QH+G P TVRRD AG K G I+ARRTGR+RG Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAARRTGRIRG 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15 Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = -3 Query: 227 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLR 382 RGVAMNPV+HPHGGGN QH+G TVRRD P G K G I+ARRTGR+RG R Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAR 251
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15 Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMNPV+HPHGGGN QH+G TVRRD P G K G I+ARRTGR+RG Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAARRTGRLRG 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.960e-15 Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMNPV+HPHGGGN QH+G TVRRD P G K G I+ARRTGR+RG Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRG 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_DICDI (60S ribosomal protein L8 OS=Dictyostelium discoideum GN=rpl8 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.866e-15 Identity = 36/55 (65.45%), Postives = 42/55 (76.36%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPV+HPHGGGN QH+G T +RD PAG K G I+ARRTGR+RG+ E Sbjct: 201 RGVAMNPVEHPHGGGNHQHVGHATTTKRDDPAGKKVGLIAARRTGRLRGTKNISE 255
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 5.050e-15 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMNPV+HPHGGGN QH+GK TV+R P G K G I+ARRTGR+RG Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAARRTGRIRG 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.050e-15 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMNPV+HPHGGGN QH+GK TV+R P G K G I+ARRTGR+RG Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAARRTGRIRG 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_SPOFR (60S ribosomal protein L8 OS=Spodoptera frugiperda GN=RpL8 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15 Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = -3 Query: 221 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTD 382 RGVAMNPV+HPHGGGN QH+GK TV+R AG K G I+ARRTGR+RG +TD Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRGG-KTD 252
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_MAMBR (60S ribosomal protein L8 OS=Mamestra brassicae GN=RpL8 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15 Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = -3 Query: 221 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTD 382 RGVAMNPV+HPHGGGN QH+GK TV+R AG K G I+ARRTGR+RG +TD Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRGG-KTD 252
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_YEAST (60S ribosomal protein L2 OS=Saccharomyces cerevisiae GN=RPL2A PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15 Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPVDHPHGGGN QH+GK T+ R +G K+G I+ARRTG +RGS +T + Sbjct: 200 RGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAARRTGLLRGSQKTQD 254 The following BLAST results are available for this feature:
BLAST of CX300804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300804 ID=CX300804; Name=CX300804; organism=Citrus sinensis; type=EST; length=384bpback to top |