CX300804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_CANGA (60S ribosomal protein L2 OS=Candida glabrata GN=RPL2 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15 Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPVDHPHGGGN QH+GK T+ R +G K+G I+ARRTG +RGS +T + Sbjct: 200 RGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAARRTGLLRGSQKTQD 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_ASHGO (60S ribosomal protein L2 OS=Ashbya gossypii GN=RPL2 PE=4 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.614e-15 Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = -3 Query: 218 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGSLRTDE 382 RGVAMNPVDHPHGGGN QH+GK T+ R +G K+G I+ARRTG +RGS +T + Sbjct: 200 RGVAMNPVDHPHGGGNHQHIGKASTISRGAVSGQKAGLIAARRTGLLRGSQKTQD 254
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_DROME (60S ribosomal protein L8 OS=Drosophila melanogaster GN=RpL8 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.125e-14 Identity = 35/49 (71.43%), Postives = 40/49 (81.63%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMNPV+HPHGGGN QH+GK TV+R AG K G I+ARRTGR+RG Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRIRG 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.275e-14 Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMNPV+HPHGGGN QH+G TV RD P G K G I+ RRTGR+RG Sbjct: 200 RGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAGRRTGRLRG 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_STAMF (50S ribosomal protein L2P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.122e-13 Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN V HPHGGG+ QH+GKP TV R+ P G K G I+ARRTGR +G Sbjct: 191 RGVAMNAVSHPHGGGSHQHVGKPSTVARETPPGRKVGHIAARRTGRRKG 239
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_METST (50S ribosomal protein L2P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl2p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.173e-13 Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = -3 Query: 239 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVR 382 RGVAMN VDHPHGGGN+QH G+P T+ R PAG K G I+A+RTG+ R Sbjct: 194 RGVAMNAVDHPHGGGNRQHPGRPTTISRHAPAGRKVGSIAAKRTGKRR 241
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_METTH (50S ribosomal protein L2P OS=Methanobacterium thermoautotrophicum GN=rpl2p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.062e-13 Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = -3 Query: 239 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVR 382 RGVAMN VDHPHGGGN+QH G+P TV R P G K G I+ARRTG+ R Sbjct: 194 RGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIAARRTGKRR 241
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SCHPO (60S ribosomal protein L2 OS=Schizosaccharomyces pombe GN=rpl2a PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.796e-12 Identity = 33/50 (66.00%), Postives = 37/50 (74.00%), Query Frame = -3 Query: 233 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRGS 382 RGVAMNPVDHPHGGGN QH+G TV R G K G I+ARRTG +RG+ Sbjct: 199 RGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLIAARRTGLLRGA 248
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_METS3 (50S ribosomal protein L2P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12 Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = -3 Query: 239 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVR 382 RGVAMN VDHPHGGGN+QH G+P TV R P G K G I+A+RTG R Sbjct: 194 RGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSIAAKRTGLKR 241
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_DESK1 (50S ribosomal protein L2P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12 Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN HPHGGG+ QH+G+P TV R+ P G K G I+ARRTGR +G Sbjct: 191 RGVAMNAAFHPHGGGSHQHVGRPSTVARNTPPGRKVGHIAARRTGRRKG 239 The following BLAST results are available for this feature:
BLAST of CX300804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300804 ID=CX300804; Name=CX300804; organism=Citrus sinensis; type=EST; length=384bpback to top |