CX300804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_ARCFU (50S ribosomal protein L2P OS=Archaeoglobus fulgidus GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.986e-11 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = -3 Query: 248 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTG 382 RGVAMN VDHP GGG QH+GKP TV R+ P G K G I+ARRTG Sbjct: 190 RGVAMNAVDHPFGGGKHQHVGKPKTVSRNAPPGRKVGSIAARRTG 234
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_AERPE (50S ribosomal protein L2P OS=Aeropyrum pernix GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.986e-11 Identity = 31/46 (67.39%), Postives = 33/46 (71.74%), Query Frame = -3 Query: 245 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGR 382 RGVAMN VDHP GGG QH G+P TV R P G K G I+ARRTGR Sbjct: 190 RGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIAARRTGR 235
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_KORCO (50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.593e-11 Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = -3 Query: 239 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVR 382 RGVAMNPV HPHGGG+ + GKP TV R P G K G I+AR+TGR + Sbjct: 191 RGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHIAARKTGRAK 238
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SULSO (50S ribosomal protein L2P OS=Sulfolobus solfataricus GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN VDHPHGGG Q + +P TV R+ P G K G I+ARRTGR G Sbjct: 189 RGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKEG 237
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SULIY (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN VDHPHGGG Q + +P TV R+ P G K G I+ARRTGR G Sbjct: 189 RGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKEG 237
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SULIN (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN VDHPHGGG Q + +P TV R+ P G K G I+ARRTGR G Sbjct: 189 RGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKEG 237
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SULIM (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN VDHPHGGG Q + +P TV R+ P G K G I+ARRTGR G Sbjct: 189 RGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKEG 237
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SULIL (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN VDHPHGGG Q + +P TV R+ P G K G I+ARRTGR G Sbjct: 189 RGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKEG 237
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SULIK (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN VDHPHGGG Q + +P TV R+ P G K G I+ARRTGR G Sbjct: 189 RGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKEG 237
BLAST of CX300804 vs. ExPASy Swiss-Prot
Match: RL2_SULIA (50S ribosomal protein L2P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.387e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 236 RGVAMNPVDHPHGGGNQQHMGKPGTVRRDKPAGAKSGQISARRTGRVRG 382 RGVAMN VDHPHGGG Q + +P TV R+ P G K G I+ARRTGR G Sbjct: 189 RGVAMNVVDHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAARRTGRKEG 237 The following BLAST results are available for this feature:
BLAST of CX300804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300804 ID=CX300804; Name=CX300804; organism=Citrus sinensis; type=EST; length=384bpback to top |