CX300803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.228e-24 Identity = 53/64 (82.81%), Postives = 62/64 (96.88%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 V+P RRVNQAI+L+ TGAREA+FRN+KTIAECLADE+INAA+GSSNSYAIKKKDE+ERVAK+NR Sbjct: 147 VAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus GN=Rps5 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.910e-24 Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRVNQAI+L+ TGAREA+FRNIKTIAECLADE+INA +GSSNSYAIKKKDE+ERVAK+NR Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKKDELERVAKSNR 204
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.910e-24 Identity = 54/64 (84.38%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRVNQAI+L+ TGAREA+FRNIK IAECLADE+INAA+GSSNSYAIKKKDE+ERVAK+NR Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5B_SCHPO (40S ribosomal protein S5-B OS=Schizosaccharomyces pombe GN=rps5b PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.169e-23 Identity = 50/64 (78.12%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRVNQA+ L+T GAREA+FRN+K+I+ECLA+E+INAA+GSSNSYAIKKKDE+ERVAK+NR Sbjct: 140 VSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5A_SCHPO (40S ribosomal protein S5-A OS=Schizosaccharomyces pombe GN=rps5a PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 7.169e-23 Identity = 50/64 (78.12%), Postives = 61/64 (95.31%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRVNQA+ L+T GAREA+FRN+K+I+ECLA+E+INAA+GSSNSYAIKKKDE+ERVAK+NR Sbjct: 140 VSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5_YEAST (40S ribosomal protein S5 OS=Saccharomyces cerevisiae GN=RPS5 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 4.647e-22 Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRVNQAI L+T GAREA+FRNIKTIAE LA+E+INAA+GSS SYAIKKKDE+ERVAK+NR Sbjct: 162 VSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELERVAKSNR 225
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5_DICDI (40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.265e-19 Identity = 43/64 (67.19%), Postives = 56/64 (87.50%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRVN A+YL+T G R A+FRNI+T+AECLADE+INA++GS NSY+IK+KD +ER AK++R Sbjct: 127 VSPMRRVNHAVYLLTQGTRAAAFRNIRTVAECLADELINASKGSPNSYSIKQKDALERTAKSHR 190
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5_ENTHI (40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 3.225e-15 Identity = 35/64 (54.69%), Postives = 51/64 (79.69%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RR+N A+YL+ G R +FRN K++AECLADE++NA++ + S+AI KK+++ERVA +NR Sbjct: 85 VSPLRRINHALYLLIMGCRCGAFRNSKSLAECLADEIVNASKSYTGSFAIMKKEDLERVANSNR 148
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_AERPE (30S ribosomal protein S7P OS=Aeropyrum pernix GN=rps7p PE=3 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 8.783e-13 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 V+P RRV+QA+ + GAR+ +F N K I ECLA+E+I AARG SYAI++K+EIER+A ++R Sbjct: 142 VAPQRRVDQALKFIADGARQCAFNNPKPIEECLAEELILAARGDPRSYAIRQKEEIERIALSSR 205
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_THEAC (30S ribosomal protein S7P OS=Thermoplasma acidophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.338e-12 Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRV++A+ + TGA ASF++ K+I CLADE++ AAR S+AI KK+EIERVA++ R Sbjct: 121 VSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMAAARNDPTSFAISKKEEIERVAQSAR 184 The following BLAST results are available for this feature:
BLAST of CX300803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300803 ID=CX300803; Name=CX300803; organism=Citrus sinensis; type=EST; length=438bpback to top |