CX300803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_THEVO (30S ribosomal protein S7P OS=Thermoplasma volcanium GN=rps7p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.359e-12 Identity = 34/64 (53.12%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RRV++A+ + TGA ASF++ K+I CLADE++ AA+ ++S+AI KK+EIERVA++ R Sbjct: 121 VSPSRRVDEALRNIATGATNASFKSKKSIVNCLADEIMLAAKNDASSFAISKKEEIERVAQSAR 184
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_PYRIL (30S ribosomal protein S7P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps7p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.693e-12 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RR++ A+ +T GAR SF N K I ECLADE+I AA SYA++K++E+ER+A A+R Sbjct: 161 VSPQRRLDLALRWITEGARTCSFNNPKPIEECLADEIIAAASNDPRSYAVRKREELERIAAASR 224
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_PYRAE (30S ribosomal protein S7P OS=Pyrobaculum aerophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.693e-12 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RR++ A+ +T GAR SF N K I ECLADE+I AA SYA++K++E+ER+A A+R Sbjct: 160 VSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREELERIAAASR 223
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.693e-12 Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP +R++ AI ++ G R ASFRN T+AE +A+E+I A+ S NSYA+ KK EIER+A++NR Sbjct: 145 VSPLKRISIAISNLSAGIRNASFRNRITLAEAIANELIAASTNSQNSYAVNKKKEIERIAQSNR 208
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_THENV (30S ribosomal protein S7P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps7p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.268e-11 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RR++ A+ +T GAR SF N K I ECLADE++ AA SYA++K++E+ER+A A+R Sbjct: 161 VSPQRRLDLALRWITEGARACSFNNPKPIEECLADELVAAAANDPKSYAVRKREELERIAAASR 224
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 1.656e-11 Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 3 Query: 24 VSPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 VSP RR++ A+ + TGA++ASF N K I E LA+E+I AA S S+AIK+K+EIER+A ++R Sbjct: 130 VSPQRRIDLALRHIATGAKDASFNNPKPIEEVLAEEIIAAANNDSKSFAIKRKEEIERIALSSR 193
BLAST of CX300803 vs. ExPASy Swiss-Prot
Match: RS7_METKA (30S ribosomal protein S7P OS=Methanopyrus kandleri GN=rps7p PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.295e-11 Identity = 32/63 (50.79%), Postives = 49/63 (77.78%), Query Frame = 3 Query: 27 SPFRRVNQAIYLMTTGAREASFRNIKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 215 SP RR++ A+ L+T GA++ +FRN K I ECLA+E+I AAR + ++I++K+EIER+A+A R Sbjct: 135 SPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRKEEIERIAEAAR 197 The following BLAST results are available for this feature:
BLAST of CX300803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX300803 ID=CX300803; Name=CX300803; organism=Citrus sinensis; type=EST; length=438bpback to top |