CX300734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_SPOFR (40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.118e-54 Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP G+R RK NHRRE+RW+ K Y KAH + KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKK+ FVPRDGCLN ++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYK KKE+PRS Sbjct: 2 GKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_PAPDA (40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.118e-54 Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP G+R RK NHRRE+RW+ K Y KAH + KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKK+ FVPRDGCLN ++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYK KKE+PRS Sbjct: 2 GKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_DERVA (40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 4.118e-54 Identity = 99/142 (69.72%), Postives = 119/142 (83.80%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP GLR RK ++HRR++RW K Y KAH + KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVPRDGCLN+++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYK KKE+PRS Sbjct: 2 GKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_YEAST (40S ribosomal protein S23 OS=Saccharomyces cerevisiae GN=RPS23A PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 5.379e-54 Identity = 101/144 (70.14%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 22 GKGKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKGKP GL + RKL+ HRR RW+ Y K + K++P GGS +KGIV+EK+G+E+KQPNSAIRK VRVQLIKNGKK+ FVP DGCLNFVDENDEVL++GFG++GK+KGDIPG RFKVVKVSGVSLLAL+K KKEKPRS Sbjct: 2 GKGKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2) HSP 1 Score: 209.92 bits (533), Expect = 5.379e-54 Identity = 102/142 (71.83%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP+GL A RKL+NHRREERW+ Y K + K++P GGS +KGIVVEKIG+EAKQPNSAIRK VRVQLIKNGKK+ FVP DGCLNFVDENDEVL+SGFG++GK+KGDIPG RFKVVKV+GV L AL+ KKEKPR+ Sbjct: 2 GKPAGLNAARKLRNHRREERWADAHYKKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHEKKEKPRA 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_SACCA (40S ribosomal protein S23 OS=Saccharomyces castellii GN=RPS23A PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 5.379e-54 Identity = 101/144 (70.14%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 22 GKGKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKGKP GL + RKL+ HRR RW+ Y K + K++P GGS +KGIV+EK+G+E+KQPNSAIRK VRVQLIKNGKK+ FVP DGCLNFVDENDEVL++GFG++GK+KGDIPG RFKVVKVSGVSLLAL+K KKEKPRS Sbjct: 2 GKGKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_SACBA (40S ribosomal protein S23 OS=Saccharomyces bayanus GN=RPS23A PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 5.379e-54 Identity = 101/144 (70.14%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 22 GKGKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKGKP GL + RKL+ HRR RW+ Y K + K++P GGS +KGIV+EK+G+E+KQPNSAIRK VRVQLIKNGKK+ FVP DGCLNFVDENDEVL++GFG++GK+KGDIPG RFKVVKVSGVSLLAL+K KKEKPRS Sbjct: 2 GKGKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_CANGA (40S ribosomal protein S23 OS=Candida glabrata GN=RPS23 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 5.379e-54 Identity = 101/144 (70.14%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 22 GKGKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKGKP GL + RKL+ HRR RW+ Y K + K++P GGS +KGIV+EK+G+E+KQPNSAIRK VRVQLIKNGKK+ FVP DGCLNFVDENDEVL++GFG++GK+KGDIPG RFKVVKVSGVSLLAL+K KKEKPRS Sbjct: 2 GKGKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_CAEEL (40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 7.025e-54 Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP GL RKLK HR+E+RW+ K+Y KAH + K+NP GG+ +KGIV+EKIG+EAKQPNSAIRK VRVQLIKNGKKI FVP DGCLNFV+ENDEVL+SGFG+ G + GDIPG RFK+VKV+ SL+AL+KGKKE+PRS Sbjct: 2 GKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143
BLAST of CX300734 vs. ExPASy Swiss-Prot
Match: RS23_DROME (40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 2.669e-53 Identity = 99/142 (69.72%), Postives = 118/142 (83.10%), Query Frame = 1 Query: 28 GKPSGLRAGRKLKNHRREERWSSKQYNKAHSVSHMKANPLGGSCMSKGIVVEKIGLEAKQPNSAIRKGVRVQLIKNGKKIACFVPRDGCLNFVDENDEVLISGFGKRGKSKGDIPGCRFKVVKVSGVSLLALYKGKKEKPRS 453 GKP GLR RK NHRR++RW+ K Y KAH + KANP GG+ +KGIV+EK+G+EAKQPNSAIRK VRVQLIKNGKKI FVPRDG LN+++ENDEVL++GFG++G + GDIPG RFKVVKV+ VSLLALYK KKE+PRS Sbjct: 2 GKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143 The following BLAST results are available for this feature:
BLAST of CX300734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300734 ID=CX300734; Name=CX300734; organism=Citrus sinensis; type=EST; length=506bpback to top |