DR908987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_CHAVU (30S ribosomal protein S19, chloroplastic OS=Chara vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.990e-34 Identity = 64/88 (72.73%), Postives = 79/88 (89.77%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PF+ANHLL+K+ LN +A+K++I+TWSR STIIP+M+GHTIAIHNGREH+PI+ITD+MVGHKLGEF+ T FRGHAKND +SRR Sbjct: 5 LKKGPFIANHLLKKVHILNLEAQKKVILTWSRGSTIIPSMIGHTIAIHNGREHIPIFITDQMVGHKLGEFSATRTFRGHAKNDKKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_CHAGL (30S ribosomal protein S19, chloroplastic OS=Chaetosphaeridium globosum GN=rps19 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.990e-34 Identity = 62/88 (70.45%), Postives = 78/88 (88.64%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 +KK PFVA+HL++KI+ LN K EK++IITWSRASTI+P M+GHTIA+HNGREHLP+++TDRMVG KLGEF+PT FRGH K+D +SRR Sbjct: 5 IKKGPFVADHLIKKIENLNAKGEKKVIITWSRASTIVPMMIGHTIAVHNGREHLPVFVTDRMVGQKLGEFSPTRTFRGHVKSDKKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_DIOEL (30S ribosomal protein S19, chloroplastic OS=Dioscorea elephantipes GN=rps19 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.599e-34 Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKKNPFV +HL KI+KLN + EKEII+TWSR STIIP M+GHTIAIHNG+EH PIYITD+MVGHKLGEF+PT+ F H +NDN+SRR Sbjct: 5 LKKNPFVVDHLSGKIEKLNMREEKEIIVTWSRGSTIIPAMMGHTIAIHNGKEHFPIYITDQMVGHKLGEFSPTLTFARHTRNDNKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_ANGEV (30S ribosomal protein S19, chloroplastic OS=Angiopteris evecta GN=rps19 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.599e-34 Identity = 66/88 (75.00%), Postives = 79/88 (89.77%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PFVANHLLRKI+ LN + EK+II+T SRASTI+PTM+GHTIA++NG+EHLPIYITDRM+GHKLGEF PT FRGHA++D +SRR Sbjct: 5 LKKGPFVANHLLRKIENLNLRKEKKIIVTRSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMIGHKLGEFVPTRIFRGHARSDKKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_ANTFO (30S ribosomal protein S19, chloroplastic OS=Anthoceros formosae GN=rps19 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.434e-34 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PFVA HLL KI+ LN K EK+II+TWSRASTI+PTM+GHTIA++NG+EHLPIYITDRMVGHKLGEFA T F+GHAK+D +SRR Sbjct: 5 LKKGPFVAYHLLEKIEDLNIKREKKIIVTWSRASTIVPTMIGHTIAVYNGQEHLPIYITDRMVGHKLGEFALTRVFKGHAKSDKKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_MESVI (30S ribosomal protein S19, chloroplastic OS=Mesostigma viride GN=rps19 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.791e-34 Identity = 64/88 (72.73%), Postives = 77/88 (87.50%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PFVA+HLL+KI+ LN K EK++I TWSR STI+P M+GHTIA+HNGREHLPI+ITD+MVGHKLGEF+PT FRGH K+D +SRR Sbjct: 5 LKKGPFVADHLLKKIEFLNVKKEKKVITTWSRGSTILPIMIGHTIAVHNGREHLPIFITDQMVGHKLGEFSPTRTFRGHTKSDKKSRR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_CHLVU (30S ribosomal protein S19, chloroplastic OS=Chlorella vulgaris GN=rps19 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.791e-34 Identity = 61/88 (69.32%), Postives = 78/88 (88.64%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PFVANHLL K+++LNT+ +K++I TWSR+STI+P M+GHTIA+HNGREH+P++ITD+MVGHKLGEFAPT FRGH K D +S+R Sbjct: 5 LKKAPFVANHLLEKVERLNTQGDKKVIKTWSRSSTIVPLMIGHTIAVHNGREHIPVFITDQMVGHKLGEFAPTRTFRGHVKKDKKSKR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RS19_CYAP7 (30S ribosomal protein S19 OS=Cyanothece sp. (strain PCC 7424) GN=rpsS PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 9.877e-34 Identity = 64/88 (72.73%), Postives = 79/88 (89.77%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PFVA+HLL KI+KLN K EK++I TWSRASTIIP MVGHTIA+HNG++H+PI+I+++MVGHKLGEFAPT FRGHAK+D ++RR Sbjct: 5 LKKGPFVADHLLSKIEKLNEKGEKQVIKTWSRASTIIPDMVGHTIAVHNGKQHVPIFISEQMVGHKLGEFAPTRTFRGHAKSDKKARR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_NEPOL (30S ribosomal protein S19, chloroplastic OS=Nephroselmis olivacea GN=rps19 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.290e-33 Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PFVANHLLRKI+K+N K EK +I TWSRASTIIP M+GHTIAIHNG+ HLPI+I DRM+GHKLGEF T N+RGH K D ++RR Sbjct: 5 LKKGPFVANHLLRKIEKMNGKGEKHVITTWSRASTIIPIMIGHTIAIHNGKSHLPIFINDRMIGHKLGEFVLTRNYRGHGKTDKKARR 92
BLAST of DR908987 vs. ExPASy Swiss-Prot
Match: RR19_CHLAT (30S ribosomal protein S19, chloroplastic OS=Chlorokybus atmophyticus GN=rps19 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.753e-33 Identity = 61/88 (69.32%), Postives = 77/88 (87.50%), Query Frame = 3 Query: 75 LKKNPFVANHLLRKIDKLNTKAEKEIIITWSRASTIIPTMVGHTIAIHNGREHLPIYITDRMVGHKLGEFAPTINFRGHAKNDNRSRR 338 LKK PFVA+HLL+KI+ LN + EK++I TWSR STI+P M+GHTIA++NGREHLPI++TD+MVGHKLGEF+PT FRGH K+D +SRR Sbjct: 5 LKKGPFVADHLLKKIEYLNARREKQVITTWSRGSTIVPIMIGHTIAVYNGREHLPIFVTDQMVGHKLGEFSPTRTFRGHVKSDKKSRR 92 The following BLAST results are available for this feature:
BLAST of DR908987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908987 ID=DR908987; Name=DR908987; organism=Citrus sinensis; type=EST; length=554bpback to top |