DR908951

Overview
NameDR908951
Unique NameDR908951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.222e-22
Identity = 51/85 (60.00%), Postives = 64/85 (75.29%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y+ +VYVLPKHLDEKV            T+L+K+QADYI VS +GP+KP HYRY
Sbjct:  386 ATGHPSFVMSSSFTNQVLAQIELFTKNA--EYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY 468          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.222e-22
Identity = 52/85 (61.18%), Postives = 60/85 (70.59%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+YI V  DGPYK  HYRY
Sbjct:  414 ATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEYIGVDVDGPYKADHYRY 496          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.820e-22
Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GP+K  HYRY
Sbjct:  387 ATGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.820e-22
Identity = 53/85 (62.35%), Postives = 62/85 (72.94%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SFTNQV+AQ+EL+ +    KY K+VYVLPKHLDE V            T+LT+EQADYI+VS +GPYKP  YRY
Sbjct:  390 ATGHPSFVMSNSFTNQVLAQIELFNKSE--KYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY 472          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.908e-22
Identity = 51/85 (60.00%), Postives = 63/85 (74.12%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SFTNQV+AQ+EL+   +T KY+K VY+LPKHLDEKV            ++LT++QADYI V  +GP+KP HYRY
Sbjct:  382 ATGHPSFVMSASFTNQVLAQIELFC--NTDKYQKDVYMLPKHLDEKVAALHLPKLGVHLSKLTQKQADYIGVPVNGPFKPDHYRY 464          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.163e-21
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SFTNQV+AQ+EL+ +    KY  +VYVLPKHLDE V            T LTK+QADYISV  +GPYKP HYRY
Sbjct:  394 ATGHPSFVMSNSFTNQVLAQIELFSKGD--KYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPIEGPYKPDHYRY 476          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.163e-21
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  413 ATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.163e-21
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  413 ATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.163e-21
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  413 ATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DR908951 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.163e-21
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 255
            ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  413 ATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
The following BLAST results are available for this feature:
BLAST of DR908951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_NOVAD5.222e-2260.00Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]
SAHH_MYCPA5.222e-2261.18Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_RHOPS6.820e-2258.82Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_PROM96.820e-2262.35Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_ZYMMO8.908e-2260.00Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]
SAHH_PROM31.163e-2162.35Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_MYCTU1.163e-2158.82Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA1.163e-2158.82Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT1.163e-2158.82Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP1.163e-2158.82Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_17079 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-56_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908951 ID=DR908951; Name=DR908951; organism=Citrus sinensis; type=EST; length=559bp
GCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACCAGGT
GATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTACGAGA
AGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGCTCTT
CACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGGC
TGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCACTACA
GGTACTAAGTGGAAGAAGAAGAAGAAGAAGAAGAAGAGTGAATGTTTTGA
GGGAAAGAAACAAAATATTTGGCCGGCTTGATTGTTTTCAATGATGATCT
GTAGTAGGATGTTAGGTTTAAATTTCGTAGTAGTGTGTGTTTGGGTGGTG
GGAAAGTTGGAGGAAAGAAACGGATTTGTTTCCGTTGATTGAAGACCATT
TGGGATTTGAATAAGGTTTTGGATGGGGCCGTGTTGGATTATTTTGTATT
TGGTGCAGTTTTAAGTTTTGCTTGCTTTGCTGCATCTTGTTATCCTTATT
GTTTACTGA
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