DR908950

Overview
NameDR908950
Unique NameDR908950
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_PROM9 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Prochlorococcus marinus (strain MIT 9312) GN=mraW PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 45/113 (39.82%), Postives = 57/113 (50.44%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 341
            AVN E++ LE  L    D L PGG + +ISFHSLEDR+VK +F             N++ L+N                      LTK+PITPS +E  +N R RS KLRV Q
Sbjct:  220 AVNKEIEVLEKFLQIVPDWLLPGGIISIISFHSLEDRLVKSSF------------KNDQRLKN----------------------LTKKPITPSEQEVEINKRARSGKLRVAQ 298          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_PROM0 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Prochlorococcus marinus (strain MIT 9301) GN=mraW PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.247e-12
Identity = 46/113 (40.71%), Postives = 56/113 (49.56%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 341
            AVN E++ LE  L    + L PGG + VISFHSLEDR+VK  F             N++ L+N                      LTK+PITPS EE  LN R RS KLR+ Q
Sbjct:  220 AVNKEIEVLEKFLQVVPEWLLPGGIISVISFHSLEDRLVKSCF------------KNDQRLKN----------------------LTKKPITPSEEEVELNKRARSGKLRIAQ 298          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_OENOB (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=mraW PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.077e-11
Identity = 46/114 (40.35%), Postives = 60/114 (52.63%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 344
            AVNDEL  L+ +L      L  GGR+ VI+F SLEDRIVK  F  +   N+  ++        + D  I E +          K+LTK P+ PS EE   N R  SAKLRV++K
Sbjct:  216 AVNDELNVLQEALKQASQLLNSGGRISVITFQSLEDRIVKHFFNQLATKNQLPSK------LPVPDKFIQEEF----------KLLTKHPLIPSVEEIEENHRAHSAKLRVLEK 313          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_LACS1 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=mraW PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.077e-11
Identity = 47/115 (40.87%), Postives = 59/115 (51.30%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL  LE SL    D L PGGR+ VI+F SLEDR+VK  F       +         L  I D            Q    K++T++PI PS +E   N R  SAKLR+I+K+
Sbjct:  216 AVNDELGALEESLEQALDLLNPGGRISVITFQSLEDRLVKVMF-----KQKTSLPELPPGLPVIPDS-----------QKVEYKLITRKPIVPSEDEITHNNRAHSAKLRIIEKL 314          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_CHLTE (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Chlorobium tepidum GN=mraW PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.077e-11
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 3
Query:    6 VNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            VNDEL  LE +L   F+ L+ GGR  VIS+HSLEDRIVK+ F +     +  A+   + L            +R+ ++     ++ ++P+  +AEE   N R RSA+LRVIQK+
Sbjct:  221 VNDELGVLEQALEDGFELLSSGGRFAVISYHSLEDRIVKRFFAA-----KTSADWGPKGLA-----------LREPLKPAEAVLVVRKPLEATAEEISRNPRSRSARLRVIQKL 318          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_PROM2 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Prochlorococcus marinus (strain MIT 9215) GN=mraW PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.407e-11
Identity = 44/113 (38.94%), Postives = 57/113 (50.44%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 341
            AVN E++ LE  L A  + L PGG + +ISFHSLEDR+VK +F             N++ L+N                      LTK+PITPS +E   N R RS KLR+ Q
Sbjct:  220 AVNKEIEVLEKFLQAVPEWLLPGGIISIISFHSLEDRLVKSSF------------KNDQRLKN----------------------LTKKPITPSEQEVEFNKRARSGKLRIAQ 298          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_PELPD (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Pelobacter propionicus (strain DSM 2379) GN=mraW PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.407e-11
Identity = 52/121 (42.98%), Postives = 64/121 (52.89%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI------RDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVN EL++LE  L +  D L PGGR  VISFHSLEDRIVK  F       RE A G     RN+      R   +              ++LT RP+T + EE R N R RSAKLR ++K+
Sbjct:  215 AVNHELESLERGLKSAIDRLKPGGRGVVISFHSLEDRIVKHVF-------REYAAGCTCP-RNLPVCVCGRQPRV--------------RVLTGRPVTATEEELRDNPRSRSAKLRAVEKL 313          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_GEOSW (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Geobacillus sp. (strain WCH70) GN=mraW PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.407e-11
Identity = 48/117 (41.03%), Postives = 64/117 (54.70%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            AVNDEL+  + ++    D L  GGR+ VI+FHSLEDRI K  F       +E ++G +    L  I D        R  +     KI+TK+PI PS EE   N R RSAKLR+ +K+
Sbjct:  212 AVNDELQAFKEAITQAIDLLKSGGRISVITFHSLEDRICKVAF-------KEASQGPQLPPGLPLIPDQ------YRPAL-----KIITKKPIVPSEEEIEHNHRARSAKLRIAEKL 310          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_BACCN (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=mraW PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.837e-11
Identity = 45/114 (39.47%), Postives = 57/114 (50.00%), Query Frame = 3
Query:    3 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 344
            AVNDELK  E +L A  + + PGGR+ VI+FHSLEDRI K TF       R            I  +                K++T++PI PS  E   N R RSAKLR+ +K
Sbjct:  212 AVNDELKVFEEALEAAIEIVKPGGRISVITFHSLEDRICKTTF------KRNSTTPELPPGLPIIPEEFKPKL----------KLITRKPILPSDVELEENNRARSAKLRIAEK 309          
BLAST of DR908950 vs. ExPASy Swiss-Prot
Match: MRAW_RICPR (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Rickettsia prowazekii GN=mraW PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.399e-11
Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 3
Query:    6 VNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 347
            +N+EL+ LE  L    + L   GRL V+SFHSLEDRIVK  F       +E++E      +  +D+      I+     W  KI+T + +TPS++E RLN R RSAKLR  +KI
Sbjct:  206 INNELEELEQFLANVKNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKQVARSKYAKDE------IKIDPNKWL-KIITPKVLTPSSQEIRLNVRARSAKLRAAKKI 305          
The following BLAST results are available for this feature:
BLAST of DR908950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MRAW_PROM98.247e-1239.82S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PROM08.247e-1240.71S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_OENOB1.077e-1140.35S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_LACS11.077e-1140.87S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CHLTE1.077e-1138.60S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PROM21.407e-1138.94S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PELPD1.407e-1142.98S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_GEOSW1.407e-1141.03S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BACCN1.837e-1139.47S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_RICPR2.399e-1141.23S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_17078 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-40_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908950 ID=DR908950; Name=DR908950; organism=Citrus sinensis; type=EST; length=559bp
CCGCAGTGAATGATGAACTCAAAACTCTGGAGAGTTCTCTCCATGCTTGT
TTTGACTGTCTTGCTCCTGGGGGTAGGCTTGGCGTTATCTCTTTCCACAG
TTTGGAGGATAGAATTGTGAAACAAACGTTTCTCAGCATCATTGACCATA
ACAGAGAAGATGCAGAGGGGAATGAAGAAGAATTGAGAAATATCAGAGAT
GACAACATAAATGAAACATGGATTAGACAGATAATACAAGGTTGGAATGG
AAAAATTCTCACCAAGAGACCGATAACACCATCTGCAGAGGAGGAAAGAC
TTAATTGCCGTTGTAGGAGTGCTAAGCTCAGGGTGATTCAGAAGATTTGA
AGAGGAGTTGAACACAAACTGCCTGAGCCTGACAAATCAAGGAAAAACCA
CCAACCAACATAATCTGTATCATCAAACTATGCCTCTGGCTTTGGTGTTC
CACCATCCCATCATTTTTATTGCCATGTCTAATGTAGGATTCATGAGTAT
GTATAAGAAAATTTATCAAGATCAAACTATGACTTGACTTGGTTACTGAA
AAAAAAAAA
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