CN189869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_YERPB (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=gcvT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = -3 Query: 203 VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 631 V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 216 VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_YERPA (Aminomethyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gcvT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = -3 Query: 203 VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 631 V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 216 VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_YERP3 (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gcvT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = -3 Query: 203 VRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 631 V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 216 VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_SHELP (Aminomethyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 57/172 (33.14%), Postives = 83/172 (48.26%), Query Frame = -3 Query: 203 PSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWA----------IGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 688 P A L +A+L+ V+ GLGARD+LRLEAG+ LYG DM++ V P+ A + W IG+ A G +K++ + E V R G P + + ++Q G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 200 PEAEAEALWQALLDNG---VKPCGLGARDTLRLEAGMNLYGQDMDESVNPLAANMGWTIAWEPEDRDFIGREALAAIKAAGTDKLVGLVMEAKGVLRTGM----PVFFTDADGVEQQ----GAITSGTFSPTLGYSIAMARVPNSV---GDVAEVEMRKKRVPVKVIAPSFV 357
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_SACD2 (Aminomethyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvT PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.149e-11 Identity = 50/140 (35.71%), Postives = 69/140 (49.29%), Query Frame = -3 Query: 203 GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 619 GLGARD+LRLEAG+ LYG++M+ + +P+ A + W I + E F+G E I + G + VG R+ V E G ITSG FSP L K++A+ V T + VR K + K FV Sbjct: 221 GLGARDTLRLEAGMNLYGHEMDDNTSPLVANMAWTIAWQPE-ERNFIGREAISAEKAAGVTHKLVGLVLQDRGVLRAEQVVTCEGVEGEGVITSGTFSPTLSKSVALARVPVAFSGECT---VAVRNKQLKALVVKPSFV 356
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_SHEPA (Aminomethyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 57/166 (34.34%), Postives = 79/166 (47.59%), Query Frame = -3 Query: 203 PSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 688 P++ A L +A L+ ++ GLGARD+LRLEAG+ LYG DM++ V P+ A + W + AE F G + + K EG + VG H D G G ITSG FSP L +IAM V + G ++E+R K + FV Sbjct: 200 PNDEAEALWQAFLDAG---IKPCGLGARDTLRLEAGMNLYGLDMDESVNPLAANMGWTVA-WEPAERDFNGRQALEKIKAEGTD-KLVGLIMDAKGVIRHGMSVFFTDSDGVEQQGTITSGTFSPTLGYSIAMARVPRSI---GDVAEVEMRKKRVPVKVIAPSFV 357
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_MYCTU (Aminomethyltransferase OS=Mycobacterium tuberculosis GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = -3 Query: 194 GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLH-KAGTKVKIEVRGKAYDGNITKMPFVPTK 619 GLGARD+LR E G L+G+++ ++P++A WA+G R+ A F G +L + GP G G +G TSG FSP L+ I + + S + G ++ ++VRG+A + + PFV K Sbjct: 226 GLGARDTLRTEMGYPLHGHELSLDISPLQARCGWAVGWRKDA---FFGRAALLAEKAAGPRRLLRGLRMVGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDSDAGIEDGQQINVDVRGRAVECQVVCPPFVAVK 365
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_MYCBO (Aminomethyltransferase OS=Mycobacterium bovis GN=gcvT PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = -3 Query: 194 GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLH-KAGTKVKIEVRGKAYDGNITKMPFVPTK 619 GLGARD+LR E G L+G+++ ++P++A WA+G R+ A F G +L + GP G G +G TSG FSP L+ I + + S + G ++ ++VRG+A + + PFV K Sbjct: 226 GLGARDTLRTEMGYPLHGHELSLDISPLQARCGWAVGWRKDA---FFGRAALLAEKAAGPRRLLRGLRMVGRGVLRPGLAVLVGDETVGVTTSGTFSPTLQVGIGLALIDSDAGIEDGQQINVDVRGRAVECQVVCPPFVAVK 365
BLAST of CN189869 vs. ExPASy Swiss-Prot
Match: GCST_SHEON (Aminomethyltransferase OS=Shewanella oneidensis GN=gcvT PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 57/166 (34.34%), Postives = 80/166 (48.19%), Query Frame = -3 Query: 203 PSERAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 688 P A L +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I + F+G K L+ L + + VG H D G G ITSG FSP L +IAM V S + G ++E+R K + FV Sbjct: 200 PETEAEALWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPTDRDFIG-RKALEALRDAGTDKLVGLVMEEKGVLRHDMPVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARVPSSI---GDTAEVEMRKKRVAVRVVAPNFV 357 The following BLAST results are available for this feature:
BLAST of CN189869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 319
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189869 ID=CN189869; Name=CN189869; organism=Citrus sinensis; type=EST; length=690bpback to top |