CN189819

Overview
NameCN189819
Unique NameCN189819
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28
Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 3
Query:   15 ALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY 395
            AL+ H V+ EG LLKPNMV PG+E+  K   + +AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GKE  V+  + AF+ R K NS A LG Y
Sbjct:  226 ALHRHGVVWEGCLLKPNMVVPGAESGLKGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.324e-26
Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 3
Query:    9 YKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 401
            + AL + +V+LEGT+LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  203 FNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.761e-26
Identity = 63/133 (47.37%), Postives = 89/133 (66.92%), Query Frame = 3
Query:    9 YKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 401
            + AL + +V+LEGT+LK +MV PG++  +  + D +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  203 FNALYEQNVVLEGTILKASMVIPGTDCEEQASIDEVAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.665e-24
Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 3
Query:    9 YKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 458
            +K + D+ V+L+G LLKP MVTPG++   K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  227 FKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 62/133 (46.62%), Postives = 86/133 (64.66%), Query Frame = 3
Query:    9 YKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 401
            + AL + +V+LEGT+LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  203 FGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23
Identity = 63/135 (46.67%), Postives = 86/135 (63.70%), Query Frame = 3
Query:   18 LNDHHVLLEGTLLKPNMVTPGS-EAPKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 419
            L +++VLLEG+ LKP+MV PG+  A K  P+ +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  252 LAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.410e-23
Identity = 61/133 (45.86%), Postives = 86/133 (64.66%), Query Frame = 3
Query:    9 YKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 401
            + AL + +V+LEGT+LK +MV  G    +  + + +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  203 FGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN189819 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.130e-19
Identity = 50/115 (43.48%), Postives = 68/115 (59.13%), Query Frame = 3
Query:   12 KALNDHHVLLEGTLLKPNMVTPGSEA-PKVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 353
            K LN   V + G L+K + VT G  +  K TP  +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  206 KYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CN189819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_TRYBB1.114e-2851.56Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF1_XYLFA2.324e-2648.12Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT6.761e-2647.37Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE1.665e-2444.37Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF1_XANAC3.710e-2446.62Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL1.079e-2346.67Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALF1_XANCP1.410e-2345.86Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_ENCCU6.130e-1943.48Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002H14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189819 ID=CN189819; Name=CN189819; organism=Citrus sinensis; type=EST; length=685bp
AGGCATGCTACAAGGCTCTGAATGACCACCATGTCCTTCTTGAGGGTACC
CTTTTGAAGCCCAACATGGTGACCCCTGGATCTGAAGCTCCCAAAGTTAC
ACCGGACGTGATTGCTGAACACACTGTCCGGGCCCTGCAACGCACTATGC
CTGCAGCAGTTCCTGCTGTTGTGTTCTTGTCTGGTGGGCAGAGTGAGGAG
GAGGCTACCCGCAACCTTAATGCCATGAACCAGCTCAAGACGAAGAAGCC
ATGGTCACTTTCCTTCTCCTTTGGACGTGCACTTCAGCAGAGCACTCTCA
AGGCATGGGCTGGAAAGGAAGAGAATGTGCAGAAGGCCCAGGCTGCTTTC
CTTGTCAGGTGCAAGGCCAACTCTGAGGCTACCCTCGGTACTTACAAGGG
TGATGCCCAGCTTGGTGAAGGTGCCGCAGAGTCTCTCCATGTCAAGGACT
ACAAATACTAAGCACAGTTGAAGCTTTGGGTGTTGTGCTTTATGAACTTT
ATGAGAGTAAATGGCGGTATGAACATTAGGTTGGCCCATTCTCATTCATA
GTTTTAGAGCTTTTTCATATTTAGGTGGAGCAATAAAAAGCTTGAGAACT
TCGGTTTGAGTGGTTTTGATCAAAACTAAACTGAAAACTGTTTATGCTTT
TGTTTTTGGTTTTCTTTTTTTTTCCTTTCCCCTAA
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