CN189792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.589e-29 Identity = 62/132 (46.97%), Postives = 85/132 (64.39%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSS---SQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++D +Q L ++L Y Y R T ++S+V P YAHLAA + +++ E + + S T+ G V V LP L+E V MF+C Sbjct: 857 NILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPEIMQDNGSPGKKNTKTTTVGDVGVKPLPALKENVKRVMFYC 988
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.589e-29 Identity = 65/138 (47.10%), Postives = 90/138 (65.22%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFE--DLSETSSSQGGMTS-------AGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV +K+CHP +DF+LC+HAG+ GTSRP HYHVL+DE F++D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ + D +S +GG +S AG V LP L++ V N MF+C Sbjct: 901 NILPGTVVDSKICHPTEFDFFLCSHAGIKGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMESDSSDSGSMASGRGGGSSTSRSTRAAGGGAVRPLPALKDSVKNVMFYC 1038
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.382e-29 Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSE--TSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 737 N+ PGTVV K+CHP +DFYL +HAG+ GTSRP HYHVL DE GF++D+LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ E +S+ +S S+ T G V + QLP +++ V MF+C Sbjct: 869 NIQPGTVVDTKICHPNEFDFYLNSHAGIQGTSRPAHYHVLLDENGFTADQLQMLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYMESE-MSDGGSSRSRSSTTGVGQV-ISQLPAIKDNVKEVMFYC 997
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO1_ARATH (Protein argonaute OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29 Identity = 64/141 (45.39%), Postives = 85/141 (60.28%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPV------------PVPQLPRLQEKVCNSMFFC 737 N+ PGTVV +K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ E S + G M G + V LP L+E V MF+C Sbjct: 908 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSMARGGGMAGRSTRGPNVNAAVRPLPALKENVKRVMFYC 1048
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28 Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVP--------------QLPRLQEKVCNSMFFC 737 N+ PGTVV +K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ D S++ S G + G P+P LP L+E V MF+C Sbjct: 941 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME-PDTSDSGSMASGAHTRGGGPLPGARSTKPAGNVAVRPLPDLKENVKRVMFYC 1082
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO7_ORYSJ (Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.863e-28 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFFC 737 N+PPGTVV + HPR +DFYLC+H G GTSRPTHYHVL+DE F SDE+Q+L+H+L Y + R T +S+V P YAHLAA + +++ D + M P+ LP+L++ V MF+C Sbjct: 928 NIPPGTVVDTVITHPREFDFYLCSHWGTKGTSRPTHYHVLWDENNFRSDEVQQLIHNLCYTFARCTRPVSLVPPAYYAHLAAYRGRLYLERSDTT--------MYRVSPLQTVPLPKLRDNVKRLMFYC 1048
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO1C_ORYSJ (Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.863e-28 Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = -2 Query: 351 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSETSSSQGGMTSAGPV--------------PVPQLPRLQEKVCNSMFFC 737 N+ PGTVV +K+CHP +DFYLC+HAG+ GTSRP HYHVL+DE F++D LQ L ++L Y Y R T ++S+V P YAHLAA + +M+ D S++SS G GP+ V LP L++ V MF+C Sbjct: 870 NILPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME-PDTSDSSSVVSGPGVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC 1011
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO13_ORYSJ (Protein argonaute 13 OS=Oryza sativa subsp. japonica GN=AGO13 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.508e-24 Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = -2 Query: 468 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMK 737 N+ PGTV ++CHP + FYLC+HAG+ GTSRPTHYHVL+DE F++DELQ L ++L Y+Y R T A+SVV P Y+HLAAS +K Sbjct: 681 NILPGTVKDRQICHPTEFYFYLCSHAGIQGTSRPTHYHVLYDENHFTADELQTLTNNLCYIYARCTHAVSVVPPAYYSHLAASHAHCCIK 770
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO2_ORYSJ (Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 4.278e-24 Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = -2 Query: 354 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFEDLSE------TSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFF 737 NV PGTVV V P YDFYLC+H G+IGTSRPTHY+ L DE GF+SD+LQ+LV++L +V+ R T +S+ P+ YA LAA + + + +S+ S+S + AG P L E + ++MFF Sbjct: 900 NVLPGTVVDTGVVDPAAYDFYLCSHNGLIGTSRPTHYYSLLDEHGFASDDLQKLVYNLCFVFARCTKPVSLATPVYYADLAAYRGRLYYEGMMMSQPPPSSAASASSASSSGAGASDFRSFPALHEDLVDNMFF 1033
BLAST of CN189792 vs. ExPASy Swiss-Prot
Match: AGO2_XENTR (Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23 Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = -2 Query: 354 NVPPGTVVANKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSDELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFM--KFEDLSETSSSQGGMTSAGPVPVPQLPRLQEKVCNSMFF 737 N+P GT V K+ HP +DFYLC+HAG+ GTSRP+HYHVL+D+ FSSDELQ L + L + Y R T ++S+ AP YAHL A + + K D +E S + G + + ++ + +M+F Sbjct: 741 NIPAGTTVDTKITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSGQSNGRDQQALAKAVQVHQDTLRTMYF 870 The following BLAST results are available for this feature:
BLAST of CN189792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189792 ID=CN189792; Name=CN189792; organism=Citrus sinensis; type=EST; length=741bpback to top |