CN189766
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37 Identity = 94/211 (44.55%), Postives = 109/211 (51.66%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSV 707 RK V GNWK N T E + + + A L S + AQNC GAFTGEVSA M+ VI GHSERR E+N V KV +ALS GL+VI C GETLEQRE G T VV Q + I + N+V+AYEPVWAIGTGK AT QA+EVH +R + D E A RI YGGSV Sbjct: 2 RKKIVVGNWKMNKTVTESLVLAAEVTAALGEGFTGCDVGIAPPFTALYEVGKLTGSRLALVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSV 212
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPB (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain BS1) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37 Identity = 91/212 (42.92%), Postives = 114/212 (53.77%), Query Frame = 3 Query: 75 RKFFVGGNWKCN-GTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSV 707 RK V GNWK N +E V S L + + + SD + AQNC GA+TGEVS ML +L ++I+GHSERR E+N V ++ AL G++VI C+GETLE+RE+G T A+V Q + I + NVVLAYEPVWAIGTGK ATP QA VHA +R + D A RI YGGSV Sbjct: 2 RKKIVVGNWKMNKNVAEGVALASSILENLDGGKMACEVGIAPAYPVLSEVGRVIEGSDICLVAQNCHYEDEGAYTGEVSVRMLDSLGCSYIIVGHSERRQYFGETNRTVNLRLKKALEGGMRVILCIGETLEEREAGVTDAIVTAQVREGLADIEDLGNVVLAYEPVWAIGTGKTATPEQADAVHASIRATISDMYGEADAEDIRIQYGGSV 213
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_BACV8 (Triosephosphate isomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.363e-37 Identity = 88/212 (41.51%), Postives = 121/212 (57.08%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLL-RSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAI-AEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGS 704 RK V GNWK N +E + LNEA ++ ++ V A+NC + GA+TGEVSAEM+ + +VILGHSERRA +E+ + + +KV AL+ LK I C+GE LE+RE+ VVA Q ++ + ++ ++LAYEPVWAIGTGK AT QAQE+HA +R + D EVA +T I+YGGS Sbjct: 2 RKNIVAGNWKMNKNLQEGIALAKELNEALAADKPNCDVVICTPFIHLASVTPIVDKAVIGVGAENCADKVSGAYTGEVSAEMVASTGAEYVILGHSERRAYYHETVEILEEKVKLALANNLKPIFCIGEVLEEREANKQNEVVAAQLASVFSLSAEDFSKIILAYEPVWAIGTGKTATAEQAQEIHAFIRSLIADKYGKEVADNTSILYGGS 213
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_HERAR (Triosephosphate isomerase OS=Herminiimonas arsenicoxydans GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.147e-37 Identity = 92/213 (43.19%), Postives = 118/213 (55.40%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSV 707 R+ V GNWK NG+ +++ + +AE L S + AQ+ GA+TGEVS ML+ + +VI+GHSERRA E+N+ V K ALS GL I CVGETLEQRE+G T VV Q A+ I+ D +V+AYEPVWAIGTGK ATP AQEVH LR+ L +A+ A RI+YGGS+ Sbjct: 2 RRKLVAGNWKMNGSLAANALLLAEI-KAEFGNPACDVAVCVPAPYLAQCLSLLSDSTIALGAQDVSSHDSGAYTGEVSTAMLLEFACRYVIVGHSERRAYFGETNELVAQKTVRALSAGLMPIVCVGETLEQREAGQTDEVVGRQIDAVLSSIAENDLAKIVVAYEPVWAIGTGKTATPEMAQEVHVMLRRRLHAK-NAQAATEVRILYGGSM 212
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.195e-36 Identity = 88/215 (40.93%), Postives = 127/215 (59.07%), Query Frame = 3 Query: 69 MARKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSV 707 M R V GNWK NG K +++ + +A +S + + +QN ++ GAFTGEVSA ML + +VI+GHSERRAL E++ + K A+A + GL I CVGETLE+R+SG+T +V Q +A+ + ++ + N ++AYEPVWAIGTGK A+P QAQ VHA LR++L + ++A S R++YGGSV Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQFLAKD-DPDIAQSLRLLYGGSV 210
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_VIBSA (Triosephosphate isomerase OS=Vibrio sp. (strain ANT-300) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36 Identity = 88/213 (41.31%), Postives = 116/213 (54.46%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSV 707 R+ V GNWK N T V+ +++ L +A + AQ+C V GAFTGE SA ML + ++GHSERR + ES++ V DK A GL + C+GETLEQ E+G T AVV Q +A+ K I++ +N V+ YEPVWAIGTGK ATP AQE+ A +R WL + A VA +I+YGGSV Sbjct: 2 RQALVMGNWKLNATKGSVEALINGLVDAAKDNATVEVAVCPPAVFIPQVEALTADTAITYGAQDCDVNTSGAFTGENSAVMLKEFGCKYTLVGHSERRVIHGESSEVVADKFAVTPENGLVPVLCIGETLEQFEAGETKAVVEAQLQAVVTKSGITSLNNAVIGYEPVWAIGTGKTATPEIAQEIPAHIRSWLAEQ-DAAVANKVQILYGGSV 213
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.038e-36 Identity = 94/217 (43.32%), Postives = 120/217 (55.30%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEE----VKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSV 707 R+ V GNWK NG+ + +I S L A ++ + AQ+ + GA+TGEVS ML +VI+GHSERRA E+N+ + K AL+ GL I CVGETL+QRE+G T +VVAEQ + I+ D +V+AYEPVWAIGTGK ATPA AQEVHA LRK L +AE A RI+YGGS+ Sbjct: 2 RRKLVAGNWKMNGSLAANTLLLTEIKSGLGNATSDVAVCVPSPYFAQCQGLLNGAAIA-----LGAQDVSSHEAGAYTGEVSTSMLQEFDCRYVIVGHSERRAYFAETNELIAQKTVRALNAGLTPIVCVGETLDQREAGQTDSVVAEQLNVVLASIAASDLAKIVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAK-NAEAAMQVRILYGGSM 212
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU5 (Triosephosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.661e-36 Identity = 87/214 (40.65%), Postives = 123/214 (57.48%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEEVKKIVSTLNEAEXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKG-GAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSV 707 R+ V GNWK NGT V +++ + + + V AQ+C ++ G GA TGEVSA+ LV+L WV++GHSERR +L E+++ V K A A + GLK + C+GETLE+RE+G T+ VVA Q + + + + + V+AYEPVWAIG+G ATP QAQEVHA +R L + +A R++YGGSV Sbjct: 2 RRPMVAGNWKMNGTRASVAELIESFRR-QALPAAVEIAVFPSFVHVSQVLDVVDGVQVSVGAQDCALQSGFGALTGEVSADQLVDLGCEWVLVGHSERRLVLGETDEVVSQKFAAAQAGGLKPVLCLGETLEEREAGRTLEVVARQLGQVLDDQGVEAFQSAVIAYEPVWAIGSGLTATPEQAQEVHAAIRDQLARS-DRRIAEGVRLLYGGSV 213
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_PORGI (Triosephosphate isomerase OS=Porphyromonas gingivalis GN=tpiA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.661e-36 Identity = 90/215 (41.86%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSVN 710 RK V GNWK N T +E + L+ A + ++ + VAA+NC ++ GA+TGEVSA M+ + +VI+GHSERRA +E++ + +KV ALS GL I CVGE LE+RE+G VVA Q + + D ++LAYEPVWAIGTGK AT QAQE+HA +RK + EVA I+YGGS N Sbjct: 2 RKNIVAGNWKMNKTLQEGLALAKELDAALKGRTINCDVIIGTPFIHLASIAAAIDTTRIGVAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGKTATADQAQEMHAHIRKSIAAKYGKEVANGCSILYGGSCN 216
BLAST of CN189766 vs. ExPASy Swiss-Prot
Match: TPIS_PORG3 (Triosephosphate isomerase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=tpiA PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.661e-36 Identity = 90/215 (41.86%), Postives = 120/215 (55.81%), Query Frame = 3 Query: 75 RKFFVGGNWKCNGTSEEVKKIVSTLNEA-EXXXXXXXXXXXXXXXXXXXXXKSLLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSRGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLXDNVSAEVAASTRIIYGGSVN 710 RK V GNWK N T +E + L+ A + ++ + VAA+NC ++ GA+TGEVSA M+ + +VI+GHSERRA +E++ + +KV ALS GL I CVGE LE+RE+G VVA Q + + D ++LAYEPVWAIGTGK AT QAQE+HA +RK + EVA I+YGGS N Sbjct: 2 RKNIVAGNWKMNKTLQEGLALAKELDAALKGRTISCDVIIGTPFIHLASIAAAIDTTRIGVAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGKTATADQAQEMHAHIRKSIAAKYGKEVANGCSILYGGSCN 216 The following BLAST results are available for this feature:
BLAST of CN189766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189766 ID=CN189766; Name=CN189766; organism=Citrus sinensis; type=EST; length=715bpback to top |