DR908861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.408e-16 Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 LS +L +AK + G E+ + +FAEAL+VIP TLAENAGL+P+ + ++ H + GI+V +G+ +++E V++P+ V AI A+E MIL+IDD++ Sbjct: 418 LSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVI 522
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 9.916e-16 Identity = 43/105 (40.95%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 LS +L +AK + G E+ + +FAEAL+VIP TLAENAGL+P+ + ++ H + G++V +G+ ++LE V+ P+ V AI A+E MIL+IDD++ Sbjct: 418 LSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVI 522
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.916e-16 Identity = 40/108 (37.04%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +AK + G E + +FA+AL++IP TLAENAGL+ + ++ ++ + H + GI+V +G+ ++LE+ +++PL V AI A+E MIL+IDD++ + Sbjct: 418 LAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.916e-16 Identity = 40/108 (37.04%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVTVR 325 L+ +L +AK + G E + +FA+AL++IP TLAENAGL+ + ++ ++ + H + GI+V +G+ ++LE+ +++PL V AI A+E MIL+IDD++ + Sbjct: 418 LAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.295e-15 Identity = 38/105 (36.19%), Postives = 67/105 (63.81%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 L+ +L +A ++SG E+ V ++A+ALE++P LAENAGL+ + + +LR H G++ +G+NV G++ + + VV+ A+ A+E ++LKIDDI+ Sbjct: 419 LASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAHEDGQVRAGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDII 523
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.691e-15 Identity = 42/105 (40.00%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 L+ +L +AK + G E+ + +FAEAL+VIP TLAENAGL+P+ + ++ H + G++V +G+ +++E+ V+ PL V AI A+E MIL+IDD++ Sbjct: 418 LAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKEKGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVI 522
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.209e-15 Identity = 42/105 (40.00%), Postives = 68/105 (64.76%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 L+ +L +AK + G E+ + +FAEAL+VIP TLAENAGL+P+ + ++ H + G++V +G+ ++LE V+ P+ V AI A+E MIL+IDD++ Sbjct: 418 LAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVI 522
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 6.427e-15 Identity = 40/106 (37.74%), Postives = 69/106 (65.09%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQIT-NILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 L+ +L +A+++ G E+ + +FA+ALE IP LAE AGL ++ + +LR RHA+G N+G++V G+I ++ N+++P+ V + + A E ILKIDD++ Sbjct: 423 LAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARHAKGLSNTGVDVIGGKIVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLI 528
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.427e-15 Identity = 40/106 (37.74%), Postives = 68/106 (64.15%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQIT-NILEENVVQPLLVSTSAITLAAECVRMILKIDDIV 316 L+ +L +A+++ G E+ + +FA+ALE IP LAE AGL ++ + +LR RHA+G N+G++V G+I ++ N+++P+ V + A E ILKIDD++ Sbjct: 423 LAMKLREYARSVGGKEQLAIEAFADALEEIPTILAETAGLEAISALMDLRARHAKGLTNTGVDVIGGKIVDDVYALNIIEPIRVKAQVLKSATEAATAILKIDDLI 528
BLAST of DR908861 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14 Identity = 38/106 (35.85%), Postives = 69/106 (65.09%), Query Frame = 2 Query: 2 LSRQLGAWAKALSGMERYCVRSFAEALEVIPYTLAENAGLNPLAIVTELRNRHAQGEINSGINVRKGQITNILEENVVQPLLVSTSAITLAAECVRMILKIDDIVT 319 +S +L A+++ G+ ++ R+ A+A+E+IP TL +N G NP+ +TELR +HA+G+ + GI+ G++ ++ E V +P V +I A E ++L++DDIV+ Sbjct: 416 VSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQHSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVS 521 The following BLAST results are available for this feature:
BLAST of DR908861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >DR908861 ID=DR908861; Name=DR908861; organism=Citrus sinensis; type=EST; length=570bpback to top |