DR908855

Overview
NameDR908855
Unique NameDR908855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_MESAU (Elongation factor 2 OS=Mesocricetus auratus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 2.005e-48
Identity = 92/166 (55.42%), Postives = 116/166 (69.88%), Query Frame = 2
Query:   23 TEVDKSL--LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 514
            T++ K +  LN +KDS+V GFQW  +EG LC+E +R V+F + D  +  + +HRG GQIIPTARR  Y++ L A PRLMEP+Y VEIQ P   V  IY VL+R+RGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW I+PGDP D S
Sbjct:  663 TDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNS 828          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_HUMAN (Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 SV=4)

HSP 1 Score: 191.815 bits (486), Expect = 2.005e-48
Identity = 92/166 (55.42%), Postives = 116/166 (69.88%), Query Frame = 2
Query:   23 TEVDKSL--LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 514
            T++ K +  LN +KDS+V GFQW  +EG LC+E +R V+F + D  +  + +HRG GQIIPTARR  Y++ L A PRLMEP+Y VEIQ P   V  IY VL+R+RGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW I+PGDP D S
Sbjct:  663 TDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNS 828          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 2.618e-48
Identity = 91/166 (54.82%), Postives = 116/166 (69.88%), Query Frame = 2
Query:   23 TEVDKSL--LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 514
            T++ K +  LN +KDS+V GFQW  +EG LC+E +R V+F + D  +  + +HRG GQIIPTARR  Y++ L A PRLMEP+Y VEIQ P   V  IY VL+R+RGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW I+PGDP D +
Sbjct:  663 TDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEETQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNT 828          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_CALJA (Elongation factor 2 OS=Callithrix jacchus GN=EEF2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 4.466e-48
Identity = 91/166 (54.82%), Postives = 116/166 (69.88%), Query Frame = 2
Query:   23 TEVDKSL--LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 514
            T++ K +  LN +KDS+V GFQW  +EG LC+E +R V+F + D  +  + +HRG GQIIPTARR  Y++ L A PRLMEP+Y VEIQ P   V  IY VL+R+RGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW I+PGDP D +
Sbjct:  663 TDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNT 828          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 7.617e-48
Identity = 91/166 (54.82%), Postives = 115/166 (69.28%), Query Frame = 2
Query:   23 TEVDKSL--LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 514
            T++ K +  LN +KDS+V GFQW  +EG LC+E +R V+F + D  +  + +HRG GQIIPTARR  Y+  L A PRLMEP+Y VEIQ P   V  IY VL+R+RGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW I+PGDP D +
Sbjct:  663 TDITKGVQYLNEIKDSVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSA 828          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 189.504 bits (480), Expect = 9.948e-48
Identity = 91/155 (58.71%), Postives = 111/155 (71.61%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLD 508
            LN +KDS+V GFQW  REG L DE +R V+F + D  +  + +HRG GQIIPTARRV Y++ L A PRL+EPVY VEIQ P   V  IY VL+RRRGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW ++PGDPL+
Sbjct:  666 LNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLE 820          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_CRIGR (Elongation factor 2 OS=Cricetulus griseus GN=EEF2 PE=3 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 1.697e-47
Identity = 91/166 (54.82%), Postives = 115/166 (69.28%), Query Frame = 2
Query:   23 TEVDKSL--LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 514
            T++ K +  LN +KDS+V GFQW  +EG LC+E +R V+F + D  +  + +HR  GQIIPTARR  Y++ L A PRLMEP+Y VEIQ P   V  IY VL+R+RGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW I+PGDP D S
Sbjct:  663 TDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNS 828          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.437e-46
Identity = 84/155 (54.19%), Postives = 115/155 (74.19%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLD 508
            LN +KDS+V GFQW ++EG L +E +R + F++ D  +  + +HRG GQIIPTARRV Y++ L A PRL+EPVY VEIQ P + +  IY+VL+++RGHV  ++ +PGTP Y +KA+LPV+ESFGF + LR  T GQAF   VFDHW ++P DPL+
Sbjct:  657 LNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLE 811          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 184.111 bits (466), Expect = 4.180e-46
Identity = 89/157 (56.69%), Postives = 109/157 (69.43%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLDKS 514
            LN +KDS+V GFQW ++EG L DE +R V+F I D  +  + +HRG GQIIPT RR  Y+A + A PRLMEPVY  EIQ P   V  IY VL+RRRGHV  +    GTP ++VKA+LPV ESFGF  DLR +T GQAF   VFDHW ++PGDP + S
Sbjct:  658 LNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPS 814          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.459e-46
Identity = 88/155 (56.77%), Postives = 107/155 (69.03%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVPGDPLD 508
            LN +KDS+V GFQW A+EG + +E +R V+F I D  +  + +HRG GQIIPT RR  Y+  L A PRLMEPVY  EIQ P   V  IY VL+RRRGHV  +    GTP +IVKA+LPV ESFGF  DLR +T GQAF   VFDHW ++PGDP +
Sbjct:  658 LNEIKDSVVAGFQWAAKEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCE 812          
The following BLAST results are available for this feature:
BLAST of DR908855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
EF2_MESAU2.005e-4855.42Elongation factor 2 OS=Mesocricetus auratus GN=EEF... [more]
EF2_HUMAN2.005e-4855.42Elongation factor 2 OS=Homo sapiens GN=EEF2 PE=1 S... [more]
EF2_BOVIN2.618e-4854.82Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]
EF2_CALJA4.466e-4854.82Elongation factor 2 OS=Callithrix jacchus GN=EEF2 ... [more]
EF2_CHICK7.617e-4854.82Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_CAEEL9.948e-4858.71Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_CRIGR1.697e-4754.82Elongation factor 2 OS=Cricetulus griseus GN=EEF2 ... [more]
EF2_BETVU1.437e-4654.19Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_DROME4.180e-4656.69Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_BOMMO5.459e-4656.77Translation elongation factor 2 OS=Bombyx mori GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_16983 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-19_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908855 ID=DR908855; Name=DR908855; organism=Citrus sinensis; type=EST; length=571bp
TTTATTAGATGACACACTCCCAACGGAAGTTGACAAGAGCTTGCTGAATG
CTGTTAAGGATTCCATTGTTCAAGGCTTTCAGTGGGGTGCTCGAGAAGGA
CCCCTCTGTGATGAACCTATCAGAAATGTCAAGTTTAAAATAGTCGATGC
AAGGATTGCACCTGAACCGCTGCATCGAGGATCTGGTCAGATCATTCCCA
CAGCTCGACGTGTGGCTTATTCAGCTTTTCTTATGGCTACCCCTCGGCTT
ATGGAACCGGTGTATTATGTTGAGATACAAACTCCAATTGATTGTGTCTC
TGCAATCTACACGGTGTTATCTAGAAGGCGTGGACATGTTACTGCCGATG
TTCCTCAACCAGGAACTCCAGCTTATATTGTTAAGGCATTTCTACCAGTG
ATTGAGAGTTTTGGTTTTGAGACGGACTTGAGGTACCATACTCAAGGGCA
AGCATTTTCCCTTTCAGTCTTTGATCATTGGGCTATAGTTCCTGGAGATC
CCCTTGACAAGAGCATAGTTCTGCGGCCGCTTGAACCTGCACCAATCCAG
CACCTTGCTCGTGAATTTATG
back to top