DR908855

Overview
NameDR908855
Unique NameDR908855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN V D ++ GF     EGPL  EP+  V  ++VDA++  + +HRG  QI P  R   + A + A P L EP   V I  P + + A+   +S+RRG +  D+ Q G    I+ A  PV E FGF   +R  T G+A
Sbjct:  554 LNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQL-IDMRQEGEVMTII-AEAPVAEMFGFAGAIRSATSGRA 688          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 52/137 (37.96%), Postives = 73/137 (53.28%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN V D ++ GF     EGPL  EP+  V  ++VDA++  + +HRG  QI P  R   + A + A P L EP   V I  P + + A+   +S+RRG +  D+ Q G    I+ A  PV E FGF   +R  T G+A
Sbjct:  554 LNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQL-IDMRQEGEVMTII-AEAPVAEMFGFAGAIRSATSGRA 688          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_METMT (Elongation factor 2 OS=Methanococcoides methylutens GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN   + +++GF    + GPL  EP   VK K++DA++  + +HRG  Q+IP +R+   +A LMA   L EP   V IQTP + +      +  RRG +  D+   G    I+++  PV E FGF  D+R  T+G+A
Sbjct:  553 LNETMELVLEGFVEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQTPQEQMGGATKEIQGRRG-IIIDMTSEGDTT-IIESKAPVSELFGFAGDIRSATEGRA 687          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.324e-17
Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQAFSLSVFDHWAIVP 493
            LN   + I++GF    + GPL  EP   VK K++DA++  + +HRG  Q+IP +R+   +A LMA   L EP   V IQ P + +      +  RRG V  D+   G    ++++  PV E FGF  D+R  T+G+A   + F  +  +P
Sbjct:  553 LNETMELIIEGFTEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQVPQEQMGGATKEIQGRRG-VIIDMTSEGDTT-VIESKAPVSELFGFAGDIRSATEGRAMWSTEFAGFEPLP 700          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 6.954e-17
Identity = 45/136 (33.09%), Postives = 77/136 (56.62%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQ 451
            L+ +K+ ++ GF+     GP+  E +  VK K++DA+I  + +HRG  Q++P  R+  + A + A P L+EP+  V I  P D + +    +  RRG +  ++ Q G     V++ +PV E FGF  D+R  T+G+
Sbjct:  554 LDEIKELLMDGFESAMDNGPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQI-VNMTQEG-DMVTVESTVPVAEMFGFAGDIRSATEGR 687          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.186e-16
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN V D ++ GF     EGPL  EP+  V  +++DA++  + +HRG  QI P  R   + A + + P L EP   V I  P + + A+   +++RRG +  D+ Q G    I+ A  PV E FGF   +R  T G+A
Sbjct:  554 LNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLIDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQL-VDMKQEGEVMTII-AEAPVAEMFGFAGAIRSATSGRA 688          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.186e-16
Identity = 45/137 (32.85%), Postives = 76/137 (55.47%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN   + +++G +    +GPL  EP++    ++ DAR+  + +HRG  Q+IP  R   +++ + A+ +L+EP+  V I  P D + A    +  RRG V  D+ Q G    +V+   PV E  GF +D+R  T+G+A
Sbjct:  553 LNETMELVIEGLEEALDDGPLASEPVQGSLIRLHDARLHEDAIHRGPAQVIPAVREAVHNSLIDASIKLLEPIQQVRIDVPNDHMGAASGEIQGRRGRVD-DMYQEG-DLMVVEGVAPVDEMIGFSSDIRSATEGRA 687          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.549e-16
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN V D ++ GF     EGPL  EP+  V  +++DA++  + +HRG  QI P  R   + A + + P L EP   V I  P + + A+   +++RRG +  D+ Q G    I+ A  PV E FGF   +R  T G+A
Sbjct:  554 LNEVMDLLIDGFHQAMDEGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQL-VDMKQEGEVMTII-AEAPVAEMFGFAGSIRSATSGRA 688          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16
Identity = 50/137 (36.50%), Postives = 72/137 (52.55%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN V D +V GF     EGPL  EP+  V  ++VDA+I  + +HRG  QI P  R   + A + + P L EP   V I  P + + ++   +++RRG +  D+ Q G    I+    PV E FGF   +R  T G+A
Sbjct:  554 LNEVMDLLVDGFHQAMDEGPLAREPVMKVIVRLVDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVVINVPYEYMGSVSREMNQRRGQL-IDMRQEGEVMIIISE-APVAEMFGFAGAIRGATSGRA 688          
BLAST of DR908855 vs. ExPASy Swiss-Prot
Match: EF2_NATPD (Elongation factor 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=fusA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.023e-16
Identity = 46/137 (33.58%), Postives = 74/137 (54.01%), Query Frame = 2
Query:   44 LNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDLRYHTQGQA 454
            LN   + +V+G +    +GPL  EP+     ++ DAR+  + +HRG  Q+IP  R   ++A + A  +L+EP+  V I  P + + A    +  RRG V  D+ Q G    +V+   PV E  GF +D+R  T+G+A
Sbjct:  554 LNETMELVVEGLEEALNDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPAVREAVHNALIDAEIKLLEPIQEVRIDVPNEHMGAASGEIQGRRGRVD-DMYQEG-DLMVVEGVAPVDEMIGFSSDIRSATEGRA 688          
The following BLAST results are available for this feature:
BLAST of DR908855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
EF2_PYRWO5.324e-1737.96Elongation factor 2 OS=Pyrococcus woesei GN=fusA P... [more]
EF2_PYRFU5.324e-1737.96Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]
EF2_METMT5.324e-1736.50Elongation factor 2 OS=Methanococcoides methyluten... [more]
EF2_METBU5.324e-1734.67Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_METTH6.954e-1733.09Elongation factor 2 OS=Methanobacterium thermoauto... [more]
EF2_PYRAB1.186e-1635.77Elongation factor 2 OS=Pyrococcus abyssi GN=fusA P... [more]
EF2_HALMA1.186e-1632.85Elongation factor 2 OS=Haloarcula marismortui GN=f... [more]
EF2_PYRHO1.549e-1635.77Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_THESM2.023e-1636.50Elongation factor 2 OS=Thermococcus sibiricus (str... [more]
EF2_NATPD2.023e-1633.58Elongation factor 2 OS=Natronomonas pharaonis (str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_16983 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-19_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908855 ID=DR908855; Name=DR908855; organism=Citrus sinensis; type=EST; length=571bp
TTTATTAGATGACACACTCCCAACGGAAGTTGACAAGAGCTTGCTGAATG
CTGTTAAGGATTCCATTGTTCAAGGCTTTCAGTGGGGTGCTCGAGAAGGA
CCCCTCTGTGATGAACCTATCAGAAATGTCAAGTTTAAAATAGTCGATGC
AAGGATTGCACCTGAACCGCTGCATCGAGGATCTGGTCAGATCATTCCCA
CAGCTCGACGTGTGGCTTATTCAGCTTTTCTTATGGCTACCCCTCGGCTT
ATGGAACCGGTGTATTATGTTGAGATACAAACTCCAATTGATTGTGTCTC
TGCAATCTACACGGTGTTATCTAGAAGGCGTGGACATGTTACTGCCGATG
TTCCTCAACCAGGAACTCCAGCTTATATTGTTAAGGCATTTCTACCAGTG
ATTGAGAGTTTTGGTTTTGAGACGGACTTGAGGTACCATACTCAAGGGCA
AGCATTTTCCCTTTCAGTCTTTGATCATTGGGCTATAGTTCCTGGAGATC
CCCTTGACAAGAGCATAGTTCTGCGGCCGCTTGAACCTGCACCAATCCAG
CACCTTGCTCGTGAATTTATG
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